Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g2076 ATGGGACATGTATTTGATGATAGGCTTTCAGTGTCTCTGGATGAGTTATGTTTCAACAATGCTGAAAATAATGGTAGCAACAAAGGAAAGATGGGCAAGAAAAACTATGGTGATGAAATTGTAGTTTTCAAATCCAAGAACCTTGAGACTGAGAGGAAGAGGAGGGAGAAGCTCAGTAGCAGGCTTTTGATGCTGCGCTCCTTAGTACCCAACATCACTAATATGAACAAAGCAACGATTATTGACGATGCTATCACTTACATCAAGAGCCTGCAAGACAAAGTACAGAGCCTCAGCCAAGAGCTTCATGAAATGGAAGCAACATCAGAGAAAATTGCAGAGCAAAAGAAACATGAAATTGACCCTGCAGAGGAGATGAAAGAATGGGGGATAAAGGAAGAGCTAAGTGTGACACAAATTGATGGGAACAAACTGTGGGTGAAGATGATAATAGAGAAGAAGATGGGAAGATTCACTAAACTGATGGAGGCCATGAATTCTTTGGGCATTGAGCTCATGGACACAAGTGTCACAACCATGAAAGGAGCATATCTTATTACAACCTCCATTCAGGGCATGGATGGTGAAGCACTTGCAGCTGAGAAAACCAAAGAGCTATTCCTAGATATAATCAGTGCCACATAG 645 0.414 MGHVFDDRLSVSLDELCFNNAENNGSNKGKMGKKNYGDEIVVFKSKNLETERKRREKLSSRLLMLRSLVPNITNMNKATIIDDAITYIKSLQDKVQSLSQELHEMEATSEKIAEQKKHEIDPAEEMKEWGIKEELSVTQIDGNKLWVKMIIEKKMGRFTKLMEAMNSLGIELMDTSVTTMKGAYLITTSIQGMDGEALAAEKTKELFLDIISAT* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g2076 214 Pfam Helix-loop-helix DNA-binding domain 46 92 IPR011598 GO:0046983
Aev03g2076 214 PANTHER TRANSCRIPTION FACTOR DYT1 9 212 - -
Aev03g2076 214 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 9 212 - -
Aev03g2076 214 SMART finulus 48 97 IPR011598 GO:0046983
Aev03g2076 214 Coils Coil 81 115 - -
Aev03g2076 214 Gene3D - 43 108 IPR036638 GO:0046983
Aev03g2076 214 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 42 91 IPR011598 GO:0046983
Aev03g2076 214 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 44 107 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g2076 Aev-Chr3 23438622 23439764 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g2076 43 213 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G21330 46.927 6.91e-47 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aev03g2076 HLH 1.1e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g2076 - - gmx:100806159 215.698