Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g2044 ATGAATGACCTATTCTCAAGTTCCTTCAAGAAGTACAGTGAGCAGACATATGCTGCAGATGTTGAGGCTGGGAAGGAAAGTATCAATCTTGACAAGTTCTTCGAAGATGTTGAGAATGTCAAAGAAGAAATGAGAACAGTTGAGAAGCTCTACAGGAAGCTGCAAGAGTCCAATGAGGAGAGCAAGATTGTCCACAATGCCAAGACAATGAAGGATCTCAGAGCAAGGATGGACCAAGATGTTACACAGGTCCTCAAGCGTGTTAAGATCATCAAGGGAAAGCTTGAAGCTCTAGAGAAATCCAATGTGGCCAACCGCAGCCTTCCGGGGTGCGGCCCTGGCTCGTCCGCAGACAGAACAAGGACCTCGGTGGTTAGTGGATTGGGGAAGAAGCTAAAGGACCTGATGGATGACTTCCAAGGGCTGAGGGCCAGGATGCAGCACGAGTACAAGGAGACGGTCGAGCGCAGGTACTTCACGATCACCGGAGAGAAAGCCGACGAGGAGACCATAGAGAATTTGATATCAAGTGGAGAGAGTGAGAGTTTCCTGCAGAGGGCAATTCAGGAACAGGGGAGGGGCCAGATCATGGACACCATATCAGAGATTCAGGAGAGACATGATGCTGTTAAGGAGATAGAGAAGAACCTGATTGAGCTTCATCAAGTGTTCTTGGACATGGCAGCTCTTGTGGAATCTCAGGGACAACAACTCAATAACATTGAGAGCCATGTTGCTCATGCTAGCTCTTTTGTGAGGAGAGGCACTGAGAACCTTCAAGAGGCTAGAGAGTACCAAAAGGACTCAAGGAAGTGGTTGTGCTATGCCATCATGCTTGGCATTGTCCTCGTCATTGTGATCATGCTTCCTATCTTGTTACAGATTGCGCCTCTATTGTTTCGGTGA 906 0.4801 MNDLFSSSFKKYSEQTYAADVEAGKESINLDKFFEDVENVKEEMRTVEKLYRKLQESNEESKIVHNAKTMKDLRARMDQDVTQVLKRVKIIKGKLEALEKSNVANRSLPGCGPGSSADRTRTSVVSGLGKKLKDLMDDFQGLRARMQHEYKETVERRYFTITGEKADEETIENLISSGESESFLQRAIQEQGRGQIMDTISEIQERHDAVKEIEKNLIELHQVFLDMAALVESQGQQLNNIESHVAHASSFVRRGTENLQEAREYQKDSRKWLCYAIMLGIVLVIVIMLPILLQIAPLLFR* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g2044 301 PANTHER SYNTAXIN 9 292 IPR045242 -
Aev03g2044 301 CDD SynN 30 187 IPR006011 GO:0016020
Aev03g2044 301 ProSitePatterns Syntaxin / epimorphin family signature. 206 245 IPR006012 GO:0005484|GO:0006886|GO:0016020
Aev03g2044 301 PANTHER SYNTAXIN-124-RELATED 9 292 - -
Aev03g2044 301 Pfam Syntaxin 32 235 IPR006011 GO:0016020
Aev03g2044 301 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 200 262 IPR000727 -
Aev03g2044 301 CDD SNARE_syntaxin1-like 199 261 - -
Aev03g2044 301 Gene3D - 30 157 - -
Aev03g2044 301 SMART SynN_4 25 151 IPR006011 GO:0016020
Aev03g2044 301 Gene3D - 191 294 - -
Aev03g2044 301 Coils Coil 30 60 - -
Aev03g2044 301 Pfam SNARE domain 237 287 IPR000727 -
Aev03g2044 301 SUPERFAMILY t-snare proteins 29 255 IPR010989 GO:0016020|GO:0016192
Aev03g2044 301 SMART tSNARE_6 195 262 IPR000727 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g2044 Aev-Chr3 23221117 23222022 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g2044 1 299 SNARE and Associated Proteins AT1G61290 76.821 5.25e-173 479
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g2044 K08486 - gmx:100818999 508.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g2044 03 23221117 23222022 Aev04g0649 04 4040837 4041757 PCT