Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g2034 ATGGAGTGGAATGCTAAATCTCCTGGGCAGTGGGACTTGGAGCACTTATTTTACTTCAATCCAAAATCAACAGAGAATCCCAGGTTTCAACCAACAGATTGGAGTGCCGAAGCAGACGGAGAAATCAATGTCGGGCTGATATATCCATCAGGTTGTAGTGGTTGTTCCGGGTCCGAACTAATTCATGCTTCATCATCAAGGAGCTCAAAGTCGGCTTCCATCAATTCATCAAATGGGGATAGCAAAACATCCACATCCATGTTCACTTTTGAAGGTTCTCAAGATGATTCAACCGGTAAGAAAGATTTCTCCAAAGAAGAGCCAGTTGAAACTTCTCTTGCTCCAGAGCCCTCTTCTGCCTCTGGTGAACCATTGCTCACTCTAAAGCTTGGTAAACGGTTGTACTTTGAGGATGTTTGTGCAGGAAGTGATTCCAAGAAAACATCTTCCGCAGGGGTTCCTGTTTCATCATCTTTAAATGCCGGAAGGAAGTGTAAATCACGTAATCAGAACATAGAACAGCCGAGCTGCCAGGTCGAAGGCTGCGGCCTTGACCTCTCATCTGCCAAAGATTATCATCGCAAGCATAGAGTCTGTGAAAGTCATTCCAAATCCCCTAAGGTGCATATCGCTGGTTTGGAACGTCGATTTTGCCAGCAATGTAGCAGGTTCCACGGTCTATCAGAGTTTGATGATAAAAAGAGAAGCTGTAGACGGCGTCTTTCTGATCACAATGCAAGGCGCCGCAAACCTCAGCCGGAAGCAATTCAGTTGAATACATCAGCTTTGTCTTCATCACCCTATGATGGGAGGCACCTGGTGAACTCATTCCCCTATTCAAAGAATCCTACAAACTTAGGTTGGCAAGGCATACAGAGTAACAGGCTCCCCCAGACAAAAGATTTTCTAATGAGACCCACAAAAGCCTTCAATTATGTCACTATGCTTTCTGATGGTTCAAGTGGCCTTCTTACACCCAAAGGCATAGCAACCAAGAGTACTATTCCAGCAGGTAAAGAAGATCCTATTACATCGTCTGATCCAAACGCTACACAAGATTTTCATCGTGCTCTCTCTCTTCTGTCAACCAATTCATGGGCTACCAATGCAACGACACAGCGCTTACCTCTTGCTTCATCGGATTACGGCAACGTTGATCAACAACCAGTCAATTCCAGCATGTGTATCTCGTATTCGGACTGTGATAACAGCAATCGCTTTCAAGACTTCCACATGTTGACTTCACCCGATGAATCCAGTTTTCCTTGCAACCAGCTGGATTAA 1284 0.4494 MEWNAKSPGQWDLEHLFYFNPKSTENPRFQPTDWSAEADGEINVGLIYPSGCSGCSGSELIHASSSRSSKSASINSSNGDSKTSTSMFTFEGSQDDSTGKKDFSKEEPVETSLAPEPSSASGEPLLTLKLGKRLYFEDVCAGSDSKKTSSAGVPVSSSLNAGRKCKSRNQNIEQPSCQVEGCGLDLSSAKDYHRKHRVCESHSKSPKVHIAGLERRFCQQCSRFHGLSEFDDKKRSCRRRLSDHNARRRKPQPEAIQLNTSALSSSPYDGRHLVNSFPYSKNPTNLGWQGIQSNRLPQTKDFLMRPTKAFNYVTMLSDGSSGLLTPKGIATKSTIPAGKEDPITSSDPNATQDFHRALSLLSTNSWATNATTQRLPLASSDYGNVDQQPVNSSMCISYSDCDNSNRFQDFHMLTSPDESSFPCNQLD* 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g2034 427 MobiDBLite consensus disorder prediction 65 94 - -
Aev03g2034 427 MobiDBLite consensus disorder prediction 95 109 - -
Aev03g2034 427 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 2 21 426 - -
Aev03g2034 427 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 21 426 IPR044817 GO:0003677
Aev03g2034 427 SUPERFAMILY SBT domain 175 256 IPR036893 GO:0003677|GO:0005634
Aev03g2034 427 MobiDBLite consensus disorder prediction 65 123 - -
Aev03g2034 427 Pfam SBP domain 177 250 IPR004333 GO:0003677
Aev03g2034 427 Gene3D - 172 238 IPR036893 GO:0003677|GO:0005634
Aev03g2034 427 ProSiteProfiles Zinc finger SBP-type profile. 174 251 IPR004333 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g2034 Aev-Chr3 23117270 23119975 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g2034 1 390 SBP-box Gene Family AT5G43270 39.706 1.53e-68 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Aev03g2034 SBP 3e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g2034 - - gmx:100796013 563.918
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g2034 03 23117270 23119975 Aev03g2034 03 23117270 23119975 ECH