Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g2013 ATGGCGGAGGAAGAAGAAACTCGAACTCTAGAAGAGAACGCTGAGTTGACTCGGACCGAGTTTCCAACGGGTCGAGTGAAGAAGATAATGAGGCTCGACGAGGATGTGAAGAGGGTTAGCGCGGAAGCTCTCTTCCTCGTGTCGCGCTCCACCGAGCTGTTCCTACAGTTTCTCGCAGAAAGCTCAGCGCGCGTCGCCGTCGAGAGGAAGCGCAAGACCGTCAAGCTTGATCACGTCACGCTCGCCGTCAAGAGGCACCAACCAACCAGCGATTTTCTCCTCGATTCGCTCCCGCCGCCGTCTCAGCCGGAAAATACGCGGGCTCCGGCCGCCGCAGATCGGAGCAAATCCGATAAGCCCGCGCCGCACGGAACTCGCCGCATCGATCAGTTCTTCCGAAAGCAGGAAGCCGAAGTTGGAGCCGGATCCGCAGCTGAAGCGCCGGTGCCGGTAGATGAGCCTTCTTGCTTTGATCCACTCACTAGCAAAATGGTTTCTCTTTTGGTTGGAGCTAGCAACAACAATAGGGATTGA 534 0.5693 MAEEEETRTLEENAELTRTEFPTGRVKKIMRLDEDVKRVSAEALFLVSRSTELFLQFLAESSARVAVERKRKTVKLDHVTLAVKRHQPTSDFLLDSLPPPSQPENTRAPAAADRSKSDKPAPHGTRRIDQFFRKQEAEVGAGSAAEAPVPVDEPSCFDPLTSKMVSLLVGASNNNRD* 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g2013 177 Gene3D Histone, subunit A 1 98 IPR009072 GO:0046982
Aev03g2013 177 MobiDBLite consensus disorder prediction 111 134 - -
Aev03g2013 177 PANTHER NUCLEAR FACTOR Y, SUBUNIT C13 6 136 - -
Aev03g2013 177 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 6 136 - -
Aev03g2013 177 MobiDBLite consensus disorder prediction 88 156 - -
Aev03g2013 177 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 19 83 IPR003958 -
Aev03g2013 177 SUPERFAMILY Histone-fold 15 86 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g2013 Aev-Chr3 22932783 22933941 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g2013 10 138 CCAAT-HAP5 Transcription Factor Family AT5G43250 59.091 7.78e-46 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Aev03g2013 CBFD_NFYB_HMF 1.5e-19 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g2013 - - adu:107468882 199.134