Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g1993 ATGTCTATATCTATGCCATGGGTCTCAACTAATGCTAATGATAATGCTATTGTTGTTGTTGTTATTGTTGTTGTTGTTTGGTGGGAGCAGAGATCAGAGATGAGAGGAAGGAGCTACAGTCCATCGCCTCCACCGGCAAGAGGCTACAGCCGAAGAGGCAGGAGTCCCAGCCCTAGGGGACGCTACTCTGGTCGCCCGAGAGACCTTCCTACCAGTCTTCTTGTTCGCAACCTTCGCCATGATTGTAGGCCTGAGGATCTTCGCAGACCTTTTGGCCAATTCGGTGCTCTCAAGGACATTTACCTGCCCAAGGATTATTACACTGGAGAACCCCGTGGTTTTGGTTTTGTCCAGTTTGTGGATCCTGCTGATGCAGCGGATGCAAAATACCATATGGATGGTCAAGTCCTTCTTGGTCGCGAGTTGACTGTTGTCTTTGCTGAGGAGAATAGAAAGAAGCCGAACGAGATGAGGACAAGAGAGAGAAGGGGAGGTCGATTTTATGATAGAAGAAGGTCTCCTCCTCGTTATTCTCGATCGCCCCGCTACTCTCGATCTCCCCCACCACGTCATAGATCGCGTTCCCGCAGTCGTGACTATTATTCCCCTCCTCCTACACGAAGGGAATATTCAAGATCTGTGTCCCCTGAGGGTAGAAGGTACAGTCGAGAAAGATCATATTCTGGCCATAGTAGAACTCCGCCTACCCCGTCCCCGTATAATAGGAGCTCAAGGAGCCGTAGTCAGAGTCCAGCAAAGGGGCCAATCCACAGCAGAAGTCCAAGTCCAGGCAGCGATGTGCGGGAGCCAACACGTGGTAGGGATCCCAGTCAGTGA 837 0.5102 MSISMPWVSTNANDNAIVVVVIVVVVWWEQRSEMRGRSYSPSPPPARGYSRRGRSPSPRGRYSGRPRDLPTSLLVRNLRHDCRPEDLRRPFGQFGALKDIYLPKDYYTGEPRGFGFVQFVDPADAADAKYHMDGQVLLGRELTVVFAEENRKKPNEMRTRERRGGRFYDRRRSPPRYSRSPRYSRSPPPRHRSRSRSRDYYSPPPTRREYSRSVSPEGRRYSRERSYSGHSRTPPTPSPYNRSSRSRSQSPAKGPIHSRSPSPGSDVREPTRGRDPSQ* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g1993 278 MobiDBLite consensus disorder prediction 35 69 - -
Aev03g1993 278 Gene3D - 63 183 IPR012677 -
Aev03g1993 278 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 71 149 IPR000504 GO:0003723
Aev03g1993 278 PANTHER SERINE/ARGININE-RICH SC35-LIKE SPLICING FACTOR SCL30A 34 262 - -
Aev03g1993 278 MobiDBLite consensus disorder prediction 153 278 - -
Aev03g1993 278 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 73 142 IPR000504 GO:0003723
Aev03g1993 278 MobiDBLite consensus disorder prediction 153 176 - -
Aev03g1993 278 MobiDBLite consensus disorder prediction 212 227 - -
Aev03g1993 278 PANTHER SERINE/ARGININE RICH SPLICING FACTOR 34 262 - -
Aev03g1993 278 MobiDBLite consensus disorder prediction 228 256 - -
Aev03g1993 278 SMART rrm1_1 72 145 IPR000504 GO:0003723
Aev03g1993 278 SUPERFAMILY RNA-binding domain, RBD 71 176 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g1993 Aev-Chr3 22677777 22680886 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g1993 71 206 Eukaryotic Initiation Factors Gene Family AT4G34110 26.471 1.47e-09 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g1993 K12900 - gmx:100775883 295.049