Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g1992 ATGGCCGCTCTCCATAACTTCTCCACCTTCAAAACCGCTACCAACGACCCTCTTTTACCCTTTCTATGGTCTGTCAAGAAAGCTCTAGAAGGTTCCAGAGAGGACCTCAGCGAGTTGCTCAGAGACTGCATCGCAAACTTCAAGGACAGCGACCGGTACCGAAACGACATCAGATTTCTCAAGATTTGGCTTCTCTATATGGGTGTTAGTTCAGATTTCCATAGTGTTTTCGCAGAAATGCTGAACAGTAAAGTGTGTGCCAACAATTCTTCCCTCTATGTGTGGTCTGCATGTTTTTTTGAGTCGAAAGGGAGGTTTCGTGATGCCCTCACAGTCTACAAGCTTGGTATTTCCTGTAATGCAGAGCCAATTGAGTGGTTGAAGAGGGCACAGACATTATTTCTTAGCAGAATATCTGAAATTTGGAGTGCTGCTTCAAGTCAGAAGATTGATGATAAAGGAAACACTGAATTGGGAAACGATTGCAGTAATTCATGGGACACCTCCACCATGCCCCTGCAAATTGATGATAAAAGATCCAGGGAATTGGGAAGTGATAGCATTAATCCATGGGACTCCTCCACCATGGATTTCCTACTGCAGAAGATAGCTCCTTTAATTGCAAAATTTAATGGGTATCATTTGAGCACTAAATCTTACACAGGAAAAGTGGCCTTATCAACTTTGAAGAATGCATCAAGGAATAAAGTTATAGAGATAGGTGGAAAAAAGTACCATATCAAAGGCTGTGCTGGACAGGGTGGTTTTGCTCAAGTATACAAGGCCTATGTCAACAGTGATCCGGATGATGTTGTTGCATTGAAGATACAAAAGCCAGCTTTCAGTTGGGAATTTTACATGTATCGTCAGCTTGATCAGCGCGTCTTAGGCAGAGAAAGGTCAAGCTATGGTTCTGCTCATAAAATTCATCTATATTCTGACTGTAGCATACTCATCTGCGACTATTTAGCTCATGGGACGCTACAGGATGTCATAAACTCATATGTGGTTCTCGGGAAATCCATGGAAGAAGTATTATGCATTTACTACACAACAGAAATGTTACACATGGTTGAAACTTTGCATGATGTTGGATTGATTCATGGTGATTTCAAGCCTGATAATTTGCTTATCCGCTATGCCAGTGGTACCCTTACTGAAGATGGGTTCTTGGACAGAAGCGGTCCTTGGTGTGATCAGGGTCTTTGCCTTGTAGACTGGGGAAGAGGGATTGATCTGCATCTCTTCCCAGATCACACGGTATTCAAGGGAGATAGCTTAACTTCTGGTTTTCGCTGCATTGAGATGCAAGAAGATAAGCCATGGAAATTTCAGTCAGATGCATATGGCATTTGCGTTGTTGTCTATATGATGTTGCATAATACCTATATGGAGATTGCGAAAAAAGAATCATCTGATGGGGGCTACGTATATCTTCCCAGACTACCCTTTAAACGTTACTGGAACACTGAGCTCTGGACGAATTTCTTCACCAAGATGCTAAATGAATACCCTGGCAATGATGATAGAAGGTTGCTACAGGAATTGAGGAAGTCCTTCCTGGATTATATGGGTTCCGATCCCAAACTGATAAAGACACTAAAGGAGTTACTCGTGAAGCAAAGAACTTCCTTGTGTACTGCTTAG 1647 0.4232 MAALHNFSTFKTATNDPLLPFLWSVKKALEGSREDLSELLRDCIANFKDSDRYRNDIRFLKIWLLYMGVSSDFHSVFAEMLNSKVCANNSSLYVWSACFFESKGRFRDALTVYKLGISCNAEPIEWLKRAQTLFLSRISEIWSAASSQKIDDKGNTELGNDCSNSWDTSTMPLQIDDKRSRELGSDSINPWDSSTMDFLLQKIAPLIAKFNGYHLSTKSYTGKVALSTLKNASRNKVIEIGGKKYHIKGCAGQGGFAQVYKAYVNSDPDDVVALKIQKPAFSWEFYMYRQLDQRVLGRERSSYGSAHKIHLYSDCSILICDYLAHGTLQDVINSYVVLGKSMEEVLCIYYTTEMLHMVETLHDVGLIHGDFKPDNLLIRYASGTLTEDGFLDRSGPWCDQGLCLVDWGRGIDLHLFPDHTVFKGDSLTSGFRCIEMQEDKPWKFQSDAYGICVVVYMMLHNTYMEIAKKESSDGGYVYLPRLPFKRYWNTELWTNFFTKMLNEYPGNDDRRLLQELRKSFLDYMGSDPKLIKTLKELLVKQRTSLCTA* 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g1992 548 PANTHER BUB1 KINASE, ISOFORM A-RELATED 13 140 - -
Aev03g1992 548 SMART mad3_bub1_i 2 117 IPR013212 -
Aev03g1992 548 PANTHER MITOTIC CHECKPOINT SERINE/THREONINE-PROTEIN KINASE BUB1 168 547 IPR015661 GO:0007094
Aev03g1992 548 Gene3D Transferase(Phosphotransferase) domain 1 242 545 - -
Aev03g1992 548 SUPERFAMILY Protein kinase-like (PK-like) 242 505 IPR011009 -
Aev03g1992 548 Pfam Protein kinase domain 245 463 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev03g1992 548 ProSitePatterns Serine/Threonine protein kinases active-site signature. 366 378 IPR008271 GO:0004672|GO:0006468
Aev03g1992 548 ProSiteProfiles BUB1 N-terminal domain profile. 1 160 IPR013212 -
Aev03g1992 548 SMART serkin_6 245 521 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev03g1992 548 Pfam Mad3/BUB1 homology region 1 14 117 IPR013212 -
Aev03g1992 548 ProSiteProfiles Protein kinase domain profile. 245 545 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev03g1992 548 PANTHER BUB1 KINASE, ISOFORM A-RELATED 168 547 - -
Aev03g1992 548 PANTHER MITOTIC CHECKPOINT SERINE/THREONINE-PROTEIN KINASE BUB1 13 140 IPR015661 GO:0007094
Aev03g1992 548 Gene3D - 8 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g1992 Aev-Chr3 22642699 22652875 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g1992 239 378 MAP Kinase Kinase Kinase Kinase AT3G15220 31.507 2.86e-08 54.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK BUB Aev03g1992 Pkinase 8.7e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g1992 K02178 - gmx:100802272 827.394