Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g1990 ATGACGAGGAACCCATCATCATCGCCGCAAGGAAGAGCATCATCGACGGTTAAGAAGACCGGGAGCACCGGTACTCCGACTCCGTGCTGCAGCAAGGTAGGGCTAAAGAGAGGGCCATGGACGCCTGAGGAAGACGAGGTGCTCGCCGATTACATCAGGAAGGAAGGAGAAGGGCGGTGGCGGACTCTGCCGAAGAGGGCGGGGCTCCTCCGCTGTGGGAAGAGCTGCCGCCTCCGGTGGATGAACTACCTCCGCCCTTCCGTCAAACGCGGACAGATCGCCGCCGACGAGGAAGATCTAATCCTCCGCCTCCACCGCCTCCTTGGTAACCGGTGGTCTTTGATAGCTGGGAGAATACCAGGAAGAACAGATAATGAAATAAAAAATTATTGGAACACCCATCTCAGCAAGAAACTCATAAGCCAAGGGATTGATCCAAGGACCCACAAGCCTCTCATACCACCAATTCTTCCTTCTCCTTCAACTACTACTACCACTACCACCACCCCACACAATAATAATAATCATTCATCCAAAGATTACCTTCCAATAATCACCAATACTAGCAATCATCATAATATTATCCTAGATCAACCCAATACTCCTATTCCTATTCCTAATAATAACAACCTCATTATCAATGGAAACCAAGAAGGATTCGATCCCAAGAGCACAAGCACACACATGGGGGAGGAGTTGGATCAGTTTCAACCACATGCTCATCATCACATAAAAGGTGCTAATAATCATAATAGTGCCTATGACAATCTTGATATCGCAAGCAATGACGTTTCCACGACAGGTTTGATTAAGAGCAATATTGATAATCTACTTATTACCTCCAACAATGAGGATACTCATCATTATGATGATGTGAACTATTGTTCTGATGATATCTTCTCTTCCTTTCTCAACTCTTTGATCAATGAGGACGCTTTTGCTTCCCATCATGTGCAATTAGAACCTCCAAATAATGGGAATAATCATAACAACAATATTGCATTATTACCTTGTGATGATCATCATGATTATGATAATGACCCTTTGATTTCAATCACCACTTCATCTGCTCTTGATGTTGCTTGGGATCAATCATCGCCACTCGTTCCTGCTACTTTCAGCCAAAAAGAAGACCCCAACTCTAAGATGGTTGAAGATGATCATCACAATAAATAA 1176 0.4447 MTRNPSSSPQGRASSTVKKTGSTGTPTPCCSKVGLKRGPWTPEEDEVLADYIRKEGEGRWRTLPKRAGLLRCGKSCRLRWMNYLRPSVKRGQIAADEEDLILRLHRLLGNRWSLIAGRIPGRTDNEIKNYWNTHLSKKLISQGIDPRTHKPLIPPILPSPSTTTTTTTTPHNNNNHSSKDYLPIITNTSNHHNIILDQPNTPIPIPNNNNLIINGNQEGFDPKSTSTHMGEELDQFQPHAHHHIKGANNHNSAYDNLDIASNDVSTTGLIKSNIDNLLITSNNEDTHHYDDVNYCSDDIFSSFLNSLINEDAFASHHVQLEPPNNGNNHNNNIALLPCDDHHDYDNDPLISITTSSALDVAWDQSSPLVPATFSQKEDPNSKMVEDDHHNK* 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g1990 391 MobiDBLite consensus disorder prediction 1 30 - -
Aev03g1990 391 MobiDBLite consensus disorder prediction 370 391 - -
Aev03g1990 391 Pfam Myb-like DNA-binding domain 95 135 IPR001005 -
Aev03g1990 391 Pfam Myb-like DNA-binding domain 37 84 IPR001005 -
Aev03g1990 391 PANTHER TRANSCRIPTION REPRESSOR MYB5-LIKE 19 320 - -
Aev03g1990 391 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 19 320 - -
Aev03g1990 391 MobiDBLite consensus disorder prediction 159 177 - -
Aev03g1990 391 CDD SANT 95 135 IPR001005 -
Aev03g1990 391 CDD SANT 39 84 IPR001005 -
Aev03g1990 391 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 85 139 IPR017930 -
Aev03g1990 391 SUPERFAMILY Homeodomain-like 34 131 IPR009057 -
Aev03g1990 391 ProSiteProfiles Myb-like domain profile. 32 84 IPR001005 -
Aev03g1990 391 SMART sant 89 137 IPR001005 -
Aev03g1990 391 SMART sant 36 86 IPR001005 -
Aev03g1990 391 Gene3D - 94 153 - -
Aev03g1990 391 Gene3D - 34 90 - -
Aev03g1990 391 MobiDBLite consensus disorder prediction 152 177 - -
Aev03g1990 391 ProSiteProfiles Myb-like domain profile. 85 135 IPR001005 -
Aev03g1990 391 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 32 84 IPR017930 -
Aev03g1990 391 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g1990 Aev-Chr3 22612542 22614635 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g1990 27 152 MYB Transcription Factor Family AT3G13540 86.508 5.85e-81 247
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Aev03g1990 Myb_DNA-binding 2.5e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g1990 K09422 - cit:102618087 330.872