Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g1947 ATGCACTGTTATACTCCTGCTTCCTATCATCATCACATATTAACACCACCTCCAACAGCAAGAACGACGCATGATTATTCTTTTTACCCTTTCAACGGATCCAAAACCGCCAGTAAGTACCCGACCCGAAACGGCGCGGGTCAGATAAGGATTGTAGCGAAGGCGGCTTGCGGCGGCGGCGGTGGTTTCGCGGTGGCGGCGGAGGAGGAGGAATGGAGAGTGAGCTTGTACGAGGTGCTGGGAGTGGCGGAGTGTGGGACGGAGGTGGAGGTGAAGAAAGCGTACAAGCAGTTAGCAAGGAAGTACCACCCGGATGTGTCGCCACCGGGTCGGGTCGAGGAGTACACGAGGAGGTTTATTCTGGTGCAGCAGGCCTACGAGACGCTCTCTGATCCCGCACTTAGAGCGCTCTATGATAGAGACTTGGCCAAGGGGCTTCAATTCGCGTTCTCTTCTCGACGCCGATTCCACCACTATGACATTGATCAGGTGATGGAACAAAGAAATGAATGGAAAACTTGCTGGCAGTCACAACTGTCAGAGCTGAAGAGAAGAAGCAAGTGCAAGGAAAATGGTTTAAGAGGGAATATGTCTTGGGCAGCTCGAATGCGTAAGCAGAGAGATGAATCAACAAATTGA 639 0.5196 MHCYTPASYHHHILTPPPTARTTHDYSFYPFNGSKTASKYPTRNGAGQIRIVAKAACGGGGGFAVAAEEEEWRVSLYEVLGVAECGTEVEVKKAYKQLARKYHPDVSPPGRVEEYTRRFILVQQAYETLSDPALRALYDRDLAKGLQFAFSSRRRFHHYDIDQVMEQRNEWKTCWQSQLSELKRRSKCKENGLRGNMSWAARMRKQRDESTN* 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g1947 212 PRINTS DnaJ domain signature 95 110 IPR001623 -
Aev03g1947 212 PRINTS DnaJ domain signature 77 95 IPR001623 -
Aev03g1947 212 PRINTS DnaJ domain signature 114 134 IPR001623 -
Aev03g1947 212 ProSitePatterns Nt-dnaJ domain signature. 119 138 IPR018253 -
Aev03g1947 212 ProSiteProfiles dnaJ domain profile. 75 142 IPR001623 -
Aev03g1947 212 SUPERFAMILY Chaperone J-domain 74 149 IPR036869 -
Aev03g1947 212 CDD DnaJ 77 131 IPR001623 -
Aev03g1947 212 Gene3D DnaJ domain 64 169 IPR036869 -
Aev03g1947 212 PANTHER CHAPERONE PROTEIN DNAJ 20, CHLOROPLASTIC 64 211 - -
Aev03g1947 212 PANTHER CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC 64 211 - -
Aev03g1947 212 Pfam DnaJ domain 76 139 IPR001623 -
Aev03g1947 212 SMART dnaj_3 74 134 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g1947 Aev-Chr3 21949795 21953460 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g1947 77 139 C2H2 Transcription Factor Family AT1G74250 42.424 3.19e-07 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g1947 - - ahf:112795692 197.593
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g1947 03 21949795 21953460 Aev03g1947 03 21949795 21953460 ECH