Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g1936 ATGTCTTCTAAAGTGAAACTGCTATTATATTATTTTTTGTCATTCATTTCTTGTACTAAGCATGATTATGATTATGCTGATCACTATGTTGTTTTTGTGAACCCAGAAGGTTTAAGTTCAGTAGCAGCCATAATGGCATTTTTTAATAAGCTTGGAAGTCTCTTGAGGCAGGGTGCTTCTCAAAGTGGACATGTTCCATCCATGCTTAATTATATTCGTTGCATGTCGTCAAGCAAGCTTTTCATTGGAGGCCTTTCATATGGAGTTGATGACCAGTCTCTCAAGGACGCATTTGCGAGCTTTGGAGATGTGGTTGAGGCAAGGGTTATCACTGATAGAGAAACTGGAAGGTCAAGGGGATTTGGATTTGTAAACTTCTCCAGTGATGAGTCAGCGACCTCAGCACTCTCTGCTATGGATGGGCAGGATCTGAACGGCCGAGTCATTAGGGTGAGCTATGCAAACGACAGGCCTTCTGGACCTCGTGCTGGTGGTGGTGGTGGTTATGGTGGTGGCGGTTTTGGTGGTGGTGGCTATGGTAGGGGTGGAGGTGGTGGGAACTATGGTGACCCAGCCTTTTAA 582 0.4502 MSSKVKLLLYYFLSFISCTKHDYDYADHYVVFVNPEGLSSVAAIMAFFNKLGSLLRQGASQSGHVPSMLNYIRCMSSSKLFIGGLSYGVDDQSLKDAFASFGDVVEARVITDRETGRSRGFGFVNFSSDESATSALSAMDGQDLNGRVIRVSYANDRPSGPRAGGGGGYGGGGFGGGGYGRGGGGGNYGDPAF* 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g1936 193 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 78 156 IPR000504 GO:0003723
Aev03g1936 193 Gene3D - 73 190 IPR012677 -
Aev03g1936 193 PANTHER HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 87F-RELATED 45 190 - -
Aev03g1936 193 SMART rrm1_1 79 152 IPR000504 GO:0003723
Aev03g1936 193 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 80 150 IPR000504 GO:0003723
Aev03g1936 193 SUPERFAMILY RNA-binding domain, RBD 73 186 IPR035979 GO:0003676
Aev03g1936 193 PANTHER GLYCINE-RICH RNA-BINDING PROTEIN 3, MITOCHONDRIAL 45 190 - -
Aev03g1936 193 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 18 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g1936 Aev-Chr3 21835616 21837014 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g1936 77 166 Eukaryotic Initiation Factors Gene Family AT4G34110 40.000 5.45e-14 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g1936 - - gmx:100499841 197.593
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g1936 03 21835616 21837014 Aev03g1936 03 21835616 21837014 ECH