Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g1929 ATGTTTGAGTTGCTTAGGTGGGGCGGTCTCCGGTCATCTCGCGGCGATAACAGTGCACGGTTGGTGCAGTATCGACGGATACTGGATTTCATCTCTATGGATGGGTTCCGATGGACACCATATTCTGACATGGACGTGATGCAGATTGTTCCGGATCATGTCCAGCAGCACTCTGTGCTGTTTCGTTCAGTTATTCCCTTGCTTTCGTTCGAGATAGTAGAGTATCATCAGCCTGATCGTGTGTTGAGGCAGTTCCACATGATGCAGCATATCCCATCTCCTCCGGCTGACCTCAGCCGCGTTCATGGCATTGATGGGAGAGGACGTCCCTCGAGATGGTGGCCTAGGGAGCACAGAGATTATTATGATATATGGGGAGATCGATACGATCGTGTGTTCACTGGGATGATGACACATGATTATCGTCCTTCAGCAGAGTATCTTCAGTGGTGGTCCTTGAGTCCGTTTAGATATCTAGGCGGAGGTCCCCCTGGCCCAGACGAGATCCCTCCAGGGTTGCCTGATGGAGTTGGCCTTGGTGTAGGTCCTCAGATTCCACACCCACCAGCAGCCCCTGATAGGAGACGTGCACGCACGAGAGCACGGACGGGCACACGTCAGAGCAGACGCCAGTACCCTATTGGGACTGCGGATGTGGGTGACTACTTTATTCCGCGCCAGACCCAGACTCAGACGCAGTCGCAGACTCGGCCGCAGTCCCGGACTAGTACCCAGATACCGCCGCAGTCCCAGTTGCCCCAGCAGTCGCATGTCGCACCGGATACGCAGACAGAGATGCACTTTGAGTCTAGGGTAGCTGCTGGAGGATCTATGTTTTTTGCTGGATTATCGTCAGATTGGAGGAGTGGTCCTGGGCAGAGCTCGCGCGATGCACCTGGATCGAGCTCGCGCGATGCACCTGGATCGAGCTCGCAGGCTGCAGCAGGGGGAGACAGTGATTGTTATAGGTCGACGATGGAGTCAGTGGACGATATTGGTATATCCATCACTGATGATGATCTTGATATGTTTGATGCATATCTTCGTCGACAGCTCCATAGCGGTGAACCTATTCCTTACAATGTAACGGTGGTATGGATAAGATCGGAAATTGAAGAAAAAACTGAACTTACACCGACATTTGCACAAAAATATCGAAGACGATTACCTAGTCAAATCAAATTGAAAACTCCGTCCGGAAAAGAATGGCAAATAAAATGTGCAAAAAGAGGTGACAAGGTATGGTTCACAGACGGTTGGAAGGATTTTGTACAACATTTTTCAATGTGTTATGGTTACACAGTATGGCTCCACTATGATGAAGAAAATACATTTGACGTTGAGATATTTGACGAAAATGAGGTTGAAGTCTCGTACGACTCTGAAGGAGATGAAGGAGACAGTAGTTTAGCTAACGACTAA 1422 0.4986 MFELLRWGGLRSSRGDNSARLVQYRRILDFISMDGFRWTPYSDMDVMQIVPDHVQQHSVLFRSVIPLLSFEIVEYHQPDRVLRQFHMMQHIPSPPADLSRVHGIDGRGRPSRWWPREHRDYYDIWGDRYDRVFTGMMTHDYRPSAEYLQWWSLSPFRYLGGGPPGPDEIPPGLPDGVGLGVGPQIPHPPAAPDRRRARTRARTGTRQSRRQYPIGTADVGDYFIPRQTQTQTQSQTRPQSRTSTQIPPQSQLPQQSHVAPDTQTEMHFESRVAAGGSMFFAGLSSDWRSGPGQSSRDAPGSSSRDAPGSSSQAAAGGDSDCYRSTMESVDDIGISITDDDLDMFDAYLRRQLHSGEPIPYNVTVVWIRSEIEEKTELTPTFAQKYRRRLPSQIKLKTPSGKEWQIKCAKRGDKVWFTDGWKDFVQHFSMCYGYTVWLHYDEENTFDVEIFDENEVEVSYDSEGDEGDSSLAND* 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g1929 473 ProSiteProfiles B3 DNA-binding domain profile. 360 453 IPR003340 GO:0003677
Aev03g1929 473 CDD B3_DNA 381 451 IPR003340 GO:0003677
Aev03g1929 473 SMART B3_2 363 453 IPR003340 GO:0003677
Aev03g1929 473 MobiDBLite consensus disorder prediction 162 264 - -
Aev03g1929 473 MobiDBLite consensus disorder prediction 287 318 - -
Aev03g1929 473 Gene3D - 361 454 IPR015300 -
Aev03g1929 473 MobiDBLite consensus disorder prediction 284 322 - -
Aev03g1929 473 Pfam B3 DNA binding domain 378 452 IPR003340 GO:0003677
Aev03g1929 473 MobiDBLite consensus disorder prediction 223 263 - -
Aev03g1929 473 Pfam Plant mobile domain 5 152 IPR019557 -
Aev03g1929 473 SUPERFAMILY DNA-binding pseudobarrel domain 366 453 IPR015300 -
Aev03g1929 473 PANTHER B3 DOMAIN-CONTAINING 364 465 - -
Aev03g1929 473 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR VRN1-LIKE 364 465 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g1929 Aev-Chr3 21687248 21689573 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g1929 357 463 B3 DNA Binding Superfamily AT3G18990 28.972 2.38e-13 69.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Aev03g1929 PMD 5.3e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g1929 - - gra:105767323 114.005