Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g1886 ATGGAATTGCTTATTCCAGAACCTGATCATGCTCTGCCCCAGGCGCACCGGGATTTTTGGCTAGAACTCATTCCTAACAAGTGGCTTCCCCGTAGATCAAACACCTGTAATTATGCAGACTTTCCTGTCCCTGTGAATAATGAACCTATCAATGCAATCCCACTTAACCATGTGGCCCCTCATTCTGGAACTATTGAACAAGCACATCATAATCTCCCCATGCCCATACATGCACGTGGTGGCCCAGGTGTGTTGCCCTACAACATGCCCTACCCATATGTTGTAACATGCACCAAAAAATTAACAGAAGGAGTATGTGCAGCTAGCCAGTTGTCTCTCCCTGCACCATTTGTTAGGCAATCATTTCCCTCTAAGCCAACCGTTATAAAAGTGGTTAGTGCCTCTGGTCGCACTTACGATATGATTATTTGGTGGGGACGAAAAAAAAATTCAAAGACCAATCTCTGTAGGGGATGGCGGGATTTCTGGAAACATCACTCACCCCAGGATGGCAATTTGCTTACGCTCAAGGCCACTTTAGGATATGAAAATGTTATGCTGATGGAGCTTATAAAGTAG 579 0.4508 MELLIPEPDHALPQAHRDFWLELIPNKWLPRRSNTCNYADFPVPVNNEPINAIPLNHVAPHSGTIEQAHHNLPMPIHARGGPGVLPYNMPYPYVVTCTKKLTEGVCAASQLSLPAPFVRQSFPSKPTVIKVVSASGRTYDMIIWWGRKKNSKTNLCRGWRDFWKHHSPQDGNLLTLKATLGYENVMLMELIK* 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g1886 192 Pfam B3 DNA binding domain 101 179 IPR003340 GO:0003677
Aev03g1886 192 ProSiteProfiles B3 DNA-binding domain profile. 96 192 IPR003340 GO:0003677
Aev03g1886 192 CDD B3_DNA 97 177 IPR003340 GO:0003677
Aev03g1886 192 Gene3D - 89 191 IPR015300 -
Aev03g1886 192 SUPERFAMILY DNA-binding pseudobarrel domain 96 177 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g1886 Aev-Chr3 21304025 21305196 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Aev03g1886 B3 2.2e-07 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g1886 - K02353 zju:107425335 45.4394