Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g1857 ATGAGTAGTGTGACGAGTGGGGGTGATGGTCGGAAAATGGCAAAGAGTCGCCGCTCATCATCGTCAGTTGACGAAGCTAGTGATGGCGGTAACACGGGAGGAGAAGGCCCTTTAAAGAAAGGCCCTTGGACAGCAGCAGAGGATGCAATTTTGGCAGAATATGTCAATAAGCATGGAGAGGGGAATTGGAATTCTGTTCAAAGGTATTCAGGACTAGCCCGATGTGGGAAGAGCTGCCGTTTACGATGGGCAAATCATTTGAGACCAGATTTGAAAAAGGGTGCGTTTAGCGAAGAGGAAGAGCGCCGAATAATTGAGCTTCATGCTGATATGGGAAACAAATGGGCTCGAATGGCTGCAGAGTTGCCTGGACGTACAGACAATGAGATTAAGAACTATTGGAACACAAGAATTAAAAGGATGCAGCGATCTGGTCAACCGATCTACCCGCCTGAGGTATCCTTACGGGTGTTGAATGGCAATCAAGAAAGTCTAAATGGTGGCAACTTGTCAGACGGAGCCAACCAGCATGATGATCCGTCGCAGGCTGACGCTTTTGATATCCCGGAATTAGATTTCAAAAATTTAAAATTCCGGCAGGGTCTACCTTATGGGGCAGCATCAATTTTTGATATACCTGAAAGCGCCACATTTGAACAAAGTTCGGACTCGTCCCATGGTTATAATATCACGCCCCAAATTTTGTATCCTCCAAGGCACCCTCCAAAGCGCCCTCGGGAATCGGATGTGATATACAACACTCTGGGCAGTAGGGGTGTCCCAACATTTGATCAGTTTGGAGATTACACTTGCGAGAAAATTCCTGACCACACTAGTTTGTCTTCTCCATGTGATCCTATTCTTAACACCAGTGACCAGTTTCACGGTGATGACATTTATGGCCGCCAAGCCACTACAAATGGCAACTTCTCGACTTCTATGCCCATATCCAGGGTCAGTAAGTCAGAGCTCCCTTCACTCCAATATTTAGAAACTCAACAAGGTATCTGGGGCATGCCCGCGTCCCCACTTCCTTCGCTTGAGTCTGTTGACACGTTGATTCAGTCTCCTCCCGCGGAGCCTATTCAGTCAAATCCTGTTTCTTCAGAGTGCAATGGTTTGCTGGAATCAATAATCTACCAGCAGAGACATACAGAAGGCTCTAACAATAACACATTGCAAGAGACACCTGATAGTTGTGTTCTCATTGAAACAGTCAAGAATTCAACCTTCATTCCATGTAAGCCGGAATGGGATGAACAAGGAGGGCCATATTCGCCCTTAGTTCCTTCGGTTCTATCGGACTACGCTCCTGTTAGCATGTGCGCCGTGGATGGGTCCCAATTCTTTGAAATTACACATGATCATGATTTTAACCATGAACTAGTCAGAGACTGTTCTGGGAACAGAGAAAAGCCTAACGAATTAGACTTAACAAGGCCTGATGTTTTACTTGACATGGGTTGGTTAGGGAATAACTTCGAGCTTGACAAGGATCAATCTGTTCTCAAAGATGCTCTCGGCTCGTTTCACGGCGAAGATCGCCACCACCGTCAGCTCTAG 1563 0.4645 MSSVTSGGDGRKMAKSRRSSSSVDEASDGGNTGGEGPLKKGPWTAAEDAILAEYVNKHGEGNWNSVQRYSGLARCGKSCRLRWANHLRPDLKKGAFSEEEERRIIELHADMGNKWARMAAELPGRTDNEIKNYWNTRIKRMQRSGQPIYPPEVSLRVLNGNQESLNGGNLSDGANQHDDPSQADAFDIPELDFKNLKFRQGLPYGAASIFDIPESATFEQSSDSSHGYNITPQILYPPRHPPKRPRESDVIYNTLGSRGVPTFDQFGDYTCEKIPDHTSLSSPCDPILNTSDQFHGDDIYGRQATTNGNFSTSMPISRVSKSELPSLQYLETQQGIWGMPASPLPSLESVDTLIQSPPAEPIQSNPVSSECNGLLESIIYQQRHTEGSNNNTLQETPDSCVLIETVKNSTFIPCKPEWDEQGGPYSPLVPSVLSDYAPVSMCAVDGSQFFEITHDHDFNHELVRDCSGNREKPNELDLTRPDVLLDMGWLGNNFELDKDQSVLKDALGSFHGEDRHHRQL* 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g1857 520 Gene3D - 95 157 - -
Aev03g1857 520 MobiDBLite consensus disorder prediction 1 42 - -
Aev03g1857 520 Gene3D - 39 92 - -
Aev03g1857 520 MobiDBLite consensus disorder prediction 161 178 - -
Aev03g1857 520 SMART sant 39 89 IPR001005 -
Aev03g1857 520 SMART sant 92 140 IPR001005 -
Aev03g1857 520 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 88 142 IPR017930 -
Aev03g1857 520 Pfam Myb-like DNA-binding domain 93 136 IPR001005 -
Aev03g1857 520 Pfam Myb-like DNA-binding domain 40 87 IPR001005 -
Aev03g1857 520 SUPERFAMILY Homeodomain-like 38 134 IPR009057 -
Aev03g1857 520 CDD SANT 42 87 IPR001005 -
Aev03g1857 520 ProSiteProfiles Myb-like domain profile. 88 138 IPR001005 -
Aev03g1857 520 ProSiteProfiles Myb-like domain profile. 35 87 IPR001005 -
Aev03g1857 520 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 38 87 IPR017930 -
Aev03g1857 520 MobiDBLite consensus disorder prediction 161 184 - -
Aev03g1857 520 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 1 515 - -
Aev03g1857 520 PANTHER TRANSCRIPTION FACTOR, PUTATIVE-RELATED 1 515 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g1857 Aev-Chr3 20951466 20954773 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g1857 19 514 MYB Transcription Factor Family AT5G06100 38.142 1.94e-83 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Aev03g1857 Myb_DNA-bind_6 3.2e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g1857 K09422 - gmx:100800658 632.484