Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g1852 ATGAGGTCAAGTGGAGCAACAACACACTGGTGTTACACATGCAATGAGCCAATCATGCTTGAATGGGGAAATGCCATTTGCCCTTACTGTCGTGGAGGCTTCATTCAAGAACTCACCAATGAGACGATGCAACAAATGGCACCGTTTCAACAATGTGGCTTTCCATCACAAGTTCAACAGTTTCGTCGTCCTCAAATCCCTAATAACATTTTTTATGGTATTCAAAATGCGTTTATGGCGCTGTGGAGACTTGCTAGCCCAATAATTGGCCTTATCATATTTGTTATTGGTAATTTCATTAGGCAGGTAACGGCCGGATTGTATCCAAATTGGAGGCCTCGTCGCTTCGTGGTAGTTCATGGAGGTCATCATCTTCCTCCTCCTCCTCCTTTTCCTCATGAGTTCACCATACCAGATAATAATTCCCCAATAAGAGGTTATTATAGTCCTCCTCCTACTCATCATATGCGTGTTGAATCCGGTGACTACTTCATGGGACCTGGATTGGAAGAACTTATTGAACAGCTCAACATGGATGATCATCAAAGCACTGGTAGTGGTGGTGGTGGTGGCGGTGGCGGTGGCGGTGGTGGTGGTTCTACTCCTACACCATCGTCTTCGGTGAATGCAATGCCTACTATTAAGATCACACAATCACACATTCGTTCTGATTCCAATTGTCCAATTTGTCAAGAAAATTTTGAGCTTGGGTTTGAGGCCAAGGCAATGCCGTGTAACCATATTTTCCACTCGGACTGCATTTCTCCTTGGTTAGCACAACATAACTCTTGCCCTGTCTGTCGTGTCGAGTTGCCACCTTCTTGA 825 0.4497 MRSSGATTHWCYTCNEPIMLEWGNAICPYCRGGFIQELTNETMQQMAPFQQCGFPSQVQQFRRPQIPNNIFYGIQNAFMALWRLASPIIGLIIFVIGNFIRQVTAGLYPNWRPRRFVVVHGGHHLPPPPPFPHEFTIPDNNSPIRGYYSPPPTHHMRVESGDYFMGPGLEELIEQLNMDDHQSTGSGGGGGGGGGGGGGSTPTPSSSVNAMPTIKITQSHIRSDSNCPICQENFELGFEAKAMPCNHIFHSDCISPWLAQHNSCPVCRVELPPS* 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g1852 274 PANTHER OS03G0351800 PROTEIN 3 273 - -
Aev03g1852 274 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 3 273 - -
Aev03g1852 274 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 198 274 IPR013083 -
Aev03g1852 274 CDD RING-H2_RNF126_like 227 268 - -
Aev03g1852 274 ProSiteProfiles Zinc finger RING-type profile. 227 268 IPR001841 -
Aev03g1852 274 SUPERFAMILY RING/U-box 208 273 - -
Aev03g1852 274 SMART ring_2 227 267 IPR001841 -
Aev03g1852 274 Pfam Ring finger domain 226 268 IPR001841 -
Aev03g1852 274 Pfam zinc-ribbon 7 38 IPR039525 GO:0061630
Aev03g1852 274 MobiDBLite consensus disorder prediction 179 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g1852 Aev-Chr3 20901903 20903384 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g1852 161 272 C3H Transcription Factor Family AT5G01980 37.500 6.04e-19 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g1852 K11982 - gmx:100813674 212.616