Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g1834 ATGCCTAGGTATTCTGAGTGTGTGTCTCTTTCACTTGCAGTTGGATTTGCAGGTCCATCCATGGCTGTCTCACTGTGGAGAGCACGTGCAGTTTCCTCAATTCTTGCCAATATTGCTAATGCCTCTCGCTGTTTCTCTTCCGATGTTGTTTCAAATATAAATGCTCATAATCCACGCGAGAATATGATGAATCAAATGATGTATTCTGACATAAATTCACAAATTGGGAGTTGTATGCCATTATCCGCGATGCGAATTGGAACCATCATTCACAACATTGAGTTGAACCCAGGGCAAGGTGGCAAACTAGTCCGAGCAGCTGGAACTAGTGCAAAGATCCTGAAAGAACCCACATCAAGATACTGTTTGATACAACTCCCTTCAGGTGTTAAAAAATTGATTGATTCTCGCTGCAGGGCCACCGTTGGTACGGTGTCTAATCCGAGCCATGGAGATCAAAAACTTAGGAAAGCTGGACATAGCCGATGGCTTGGTCGAAGACCAGTTGTTCGTGGTGTGGCCATGAATCCCGTAGATCATCCTCATGGTGGTGGAGAGGGTAAGAGCAAGAGTAGCGGTCGGTGGGGGCGAGGATCTCGTACTCCTTGGGGCAAACCAACTAAAAGTGGCTACAAGACTGGACCCTTAAAGCGCAGAAGGTAG 663 0.4661 MPRYSECVSLSLAVGFAGPSMAVSLWRARAVSSILANIANASRCFSSDVVSNINAHNPRENMMNQMMYSDINSQIGSCMPLSAMRIGTIIHNIELNPGQGGKLVRAAGTSAKILKEPTSRYCLIQLPSGVKKLIDSRCRATVGTVSNPSHGDQKLRKAGHSRWLGRRPVVRGVAMNPVDHPHGGGEGKSKSSGRWGRGSRTPWGKPTKSGYKTGPLKRRR* 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g1834 220 Pfam Ribosomal Proteins L2, C-terminal domain 75 204 IPR022669 GO:0003735|GO:0005840|GO:0006412
Aev03g1834 220 SMART Ribosomal_L2_C_2 73 206 IPR022669 GO:0003735|GO:0005840|GO:0006412
Aev03g1834 220 PANTHER 39S RIBOSOMAL PROTEIN L2, MITOCHONDRIAL 58 220 - -
Aev03g1834 220 MobiDBLite consensus disorder prediction 174 220 - -
Aev03g1834 220 ProSitePatterns Ribosomal protein L2 signature. 168 179 IPR022671 GO:0003735|GO:0005840|GO:0006412
Aev03g1834 220 Gene3D - 69 145 IPR014722 -
Aev03g1834 220 SUPERFAMILY Translation proteins SH3-like domain 75 209 IPR008991 -
Aev03g1834 220 Gene3D Ribosomal protein L2, domain 3 146 220 IPR014726 -
Aev03g1834 220 PANTHER RIBOSOMAL PROTEIN L2 58 220 IPR002171 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g1834 Aev-Chr3 20686101 20687663 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g1834 65 185 Cytoplasmic Ribosomal Protein Gene Family AT3G51190 41.860 1.46e-23 93.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g1834 - - lang:109347761 330.487