Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g1829 ATGGAGCATGTAGATTCCTTCATTCACTGTGATCGATCTGCAAAATCAAGTTCTGTGGATGTTTCAAATTTAAACCTTCAACAACCAAATCATGCCTCTGTTGATAATGAAGCTCCAATTCCAACCAATCAAGACAATAATTGTGAAATATCAATTACATCTGTGATCAAAATCATGCGACAGAGCCTTCCAGATAACGCAAAATTCAAGGATGATGCTGAGGTGCTATTTCCGCCATGTGTTTCAAAGTTAATAAGCTTCGTAACCAACAAGGCCAATGTGAAGTGCCAACGCGAGCGCAGAAAGACTTTGAAAACAGAGGACTTATTGTGGGCAATGGAGAATCTTGGCTTTAATGATTATGTTGGGCCTCTTTGTAGTTACCTTAATCACTATCGCCATAATAAAGGCAACGTCACCATAAATAATGGACCTAGGCCTAATCAGGCACCTAATTATGAACCTAGGCCTATTTCCAATAATAGTGGGTTCATTTCTGAGCCCAAGCTTGGACCTATTAATGGGCCTACACCTCAGCCTCTTCATGGGATTGCACCTGAGTCTAGTCTTGGGATGCTTCAATCAACCTTGTCCACACAACCACCACCATTTTCTTCTGGTCAAGGATTTTCCATGAACTTAGAAAGAAATTTGGATATGGTTGATGCACCAATGAACTTGGATGAGTTCTTAGGAGATGGGTCAAATAATGATGGTTCCCCATATGATGATATAGCTGATTTTGATCCATCTGTTTTCCTCAACCTCGATTTTGATAACATTTAA 786 0.3995 MEHVDSFIHCDRSAKSSSVDVSNLNLQQPNHASVDNEAPIPTNQDNNCEISITSVIKIMRQSLPDNAKFKDDAEVLFPPCVSKLISFVTNKANVKCQRERRKTLKTEDLLWAMENLGFNDYVGPLCSYLNHYRHNKGNVTINNGPRPNQAPNYEPRPISNNSGFISEPKLGPINGPTPQPLHGIAPESSLGMLQSTLSTQPPPFSSGQGFSMNLERNLDMVDAPMNLDEFLGDGSNNDGSPYDDIADFDPSVFLNLDFDNI* 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g1829 261 MobiDBLite consensus disorder prediction 141 166 - -
Aev03g1829 261 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 24 146 IPR027113 GO:0001228|GO:0006355|GO:0016602
Aev03g1829 261 SUPERFAMILY Histone-fold 52 153 IPR009072 GO:0046982
Aev03g1829 261 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 51 113 IPR003958 -
Aev03g1829 261 Gene3D Histone, subunit A 41 154 IPR009072 GO:0046982
Aev03g1829 261 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-6 24 146 - -
Aev03g1829 261 PRINTS CCAAT-binding transcription factor subunit A signature 77 95 - -
Aev03g1829 261 PRINTS CCAAT-binding transcription factor subunit A signature 96 114 - -
Aev03g1829 261 PRINTS CCAAT-binding transcription factor subunit A signature 115 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g1829 Aev-Chr3 20553041 20554016 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g1829 16 133 CCAAT-HAP3 Transcription Factor Family AT1G21970 44.915 2.84e-29 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Aev03g1829 CBFD_NFYB_HMF 2.3e-15 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g1829 K08065 - pda:120105174 119.012