Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g1793 ATGGGTCGGTGCCGAACCGCGTCACGCCCCCCTGACGATGACCCCACCCTAAGGTTCAAGAGAAAGAGGGATGCTTCAAATCTAGAGAATTTAGATGCTTCATCTACAGCCCAAGGAGTAACTGATGGGAAGGTATCTCTATACCACTGTAATTATTGCAACAAAGATATTTCGGGGAAGGTTCGCATTAAGTGTGCCGTGTGCCAAGATTTTGATCTCTGTGTTGAGTGCTTCTTTGTTGGTGCTGAGGTGACACCTCACAAAAGCAATCATCCATATAGGATTATGGATAATCTATCTTTTCCACTTATATGTCCAGACTGGAATGTAGATGAAGAGATGTTACTTCTAGAGGCCATTGAAATGTATGGATTTGGGAATTGGAATGAAGTTGCTGAATATGTTGGGACAAAAAGCAAATCTCAATGTATCAACCACTATAATGCTGTATATATGAATTCACCATGTTTTCCTCTCCCTGATTTGTCTAACGTTATGGGAAAGAGCAGAGAGGAACTACTTGAAATGGCAAAGGAACATGAAGTCAAGAAAGAATTTCCTCCAACTACTGGGCATACTCTGAAACAAGAACCTCCCTTGTCTGAAGGAATAAATTCTGAAGAATCTAACCGAACTGGAACTACTAATCAAGCAGCGTCTATGTCAACCTCAGCATGTGGCAAAGCTTACTCAAGTGCAGTTAAGAAGGCTTCTAACTTGAGCCAGAATTCTGAAGTTAAGGTGGAAGATTCTCAAGCAGATCGGAGCATTGGAGAGAAGAAACCAAAGTTATCTGGGGAAGACAAGCCCTCTATGATTGAGTTGAGTGGATACAATTTTAAGAGAGAGGAATTTGAAATTGAATATGACAATGATGCAGAGCAAGTATTGGCAGATATGGAATTTAAAGACACTGATTCTAAAGCTGAATTTGAAATGAAGCTGCATGTGCTCCATATTTATTCAAAAAGACTAGATGAGCGGAAGCACAGAAAGGCTTTTATTCTTGAAAGAAATTTACTTTATCCCGATCCTTTTGAGGAATCTCTCACACCTGAAGAGCTTGAAATATGTCAGCGCTACAAGGTCTTCATGCGGTTTCACTCAAAAGAAGAACATATGGAGATGCTAAAAAATATTATTGAAGAATACAGGCTTCTCAAAAGAATACAAGATTTACAGGAAGCTCGAACTGCTGCTCGGTGTCAAACTGCTGCTGAAGCTTATAGATTTATCGAAAATAAGGCGACAGTGCCGAAGCCGAATTATTTCAAAGGAGAATTTGATAGCGCCCCGCACGGCCTTCATACCTGTGTCGAGGATTCAGTTATGGCCATACACGATATATCAAGGTCCCTAGAGGAATGGGATATCAGTGAATTTACCGGGGCTGAATTATTATCCGAATATGAGAAAAAGCTTTGTAGTGAGATCAGAATACTACCATCACACTATCTCAAGATGCTGAAGGTCCTGTTATTGGAGATTTCTAGGGGCAATGTGAGGGGAAAATGTGATGCACATGCACTGTTCAAGGTAGAACCAAGCAAGGTTGATAGAATTTATGATATGATTCTTGAAAAGGGGATTGTTCCAGCAAATTGA 1605 0.405 MGRCRTASRPPDDDPTLRFKRKRDASNLENLDASSTAQGVTDGKVSLYHCNYCNKDISGKVRIKCAVCQDFDLCVECFFVGAEVTPHKSNHPYRIMDNLSFPLICPDWNVDEEMLLLEAIEMYGFGNWNEVAEYVGTKSKSQCINHYNAVYMNSPCFPLPDLSNVMGKSREELLEMAKEHEVKKEFPPTTGHTLKQEPPLSEGINSEESNRTGTTNQAASMSTSACGKAYSSAVKKASNLSQNSEVKVEDSQADRSIGEKKPKLSGEDKPSMIELSGYNFKREEFEIEYDNDAEQVLADMEFKDTDSKAEFEMKLHVLHIYSKRLDERKHRKAFILERNLLYPDPFEESLTPEELEICQRYKVFMRFHSKEEHMEMLKNIIEEYRLLKRIQDLQEARTAARCQTAAEAYRFIENKATVPKPNYFKGEFDSAPHGLHTCVEDSVMAIHDISRSLEEWDISEFTGAELLSEYEKKLCSEIRILPSHYLKMLKVLLLEISRGNVRGKCDAHALFKVEPSKVDRIYDMILEKGIVPAN* 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g1793 534 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 108 155 IPR017930 -
Aev03g1793 534 Pfam Myb-like DNA-binding domain 108 148 IPR001005 -
Aev03g1793 534 PANTHER TRANSCRIPTIONAL ADAPTOR 2 ADA2 -RELATED 2 532 - -
Aev03g1793 534 Gene3D - 448 532 IPR036388 -
Aev03g1793 534 ProSiteProfiles Zinc finger ZZ-type profile. 45 101 IPR000433 GO:0008270
Aev03g1793 534 SMART zz_5 44 89 IPR000433 GO:0008270
Aev03g1793 534 PANTHER TRANSCRIPTIONAL ADAPTER ADA2B 2 532 IPR034318 GO:0003713|GO:0006357|GO:0035065
Aev03g1793 534 ProSitePatterns Zinc finger ZZ-type signature. 50 77 IPR000433 GO:0008270
Aev03g1793 534 MobiDBLite consensus disorder prediction 238 270 - -
Aev03g1793 534 ProSiteProfiles SANT domain profile. 103 155 IPR017884 -
Aev03g1793 534 ProSiteProfiles SWIRM domain profile. 447 534 IPR007526 GO:0005515
Aev03g1793 534 MobiDBLite consensus disorder prediction 180 220 - -
Aev03g1793 534 SUPERFAMILY Homeodomain-like 450 532 IPR009057 -
Aev03g1793 534 CDD SANT 108 148 IPR001005 -
Aev03g1793 534 MobiDBLite consensus disorder prediction 248 268 - -
Aev03g1793 534 MobiDBLite consensus disorder prediction 194 220 - -
Aev03g1793 534 Pfam Zinc finger, ZZ type 48 88 IPR000433 GO:0008270
Aev03g1793 534 SUPERFAMILY RING/U-box 48 110 - -
Aev03g1793 534 Gene3D - 42 96 IPR043145 -
Aev03g1793 534 SMART sant 104 153 IPR001005 -
Aev03g1793 534 PIRSF Txn_adaptor_ADA2 425 533 IPR016827 GO:0003713|GO:0006357|GO:0035065
Aev03g1793 534 PIRSF Txn_adaptor_ADA2 35 425 IPR016827 GO:0003713|GO:0006357|GO:0035065
Aev03g1793 534 SUPERFAMILY Homeodomain-like 101 154 IPR009057 -
Aev03g1793 534 ProSiteProfiles Myb-like domain profile. 108 151 IPR001005 -
Aev03g1793 534 CDD ZZ_ADA2 48 96 IPR041983 -
Aev03g1793 534 Gene3D - 102 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g1793 Aev-Chr3 20019931 20029259 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g1793 1 530 EF-hand Containing Proteins AT3G07740 52.313 0.0 543
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Aev03g1793 Myb_DNA-binding 1.4e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g1793 K11314 - gmx:100779424 771.155