Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g1782 ATGGCCGACCACGGCGGCATCACCATGTCTCTCTCCCACACTTCCGACGACTCCTCCTCCGACCAGCACCCCACGCAGGGCGGAGGAGGAGGCAGCGTCGTCGGCTCCTCCTCCCACCACCGGAGGCTAACGACACCATGCTCACCCACCACCACCACCACCTTCCACCAGGCTCTAGCCCTGCCGCCTCATAAGAAGCCACGTGGCAGGCCTCCAGGCTCCAAGAACAAGCCAAAGCCTCCTGTTGTAATCACCAAGGACAGCAGCGAGGAGTCGCTGAAACCAGTGGTCATCGAAGTAGCCACCGGCTCCGACATCTTGGAGGCGGTGGTGACCTTCGCACGCCGCCGTAACGTAGGAATCTCCGTCCTAAGTGGGTCCGGCACCATCGGTAGCGTGACACTTCGACACCCTTACTCTCACGCTCCTGCTCTCACACTCCATGGCCCCTTCACCTTGTTAACCTTCACTGGCAGTTACATAACTCACAATTCTTCTTCATCATCGTCATCTTCATCGGTTTGTTCTTCCTTTGCTGTGTCGTTTTCGGGGTCACAGGGGCAGATATTTGGTGGCGTTGTCGCTGGGAGTCTGATAGCTGCCACGTCAGTTATGATTGTGGCTTCTGTGTTTAAGAAGCCTGTAGAGATTCATAGGATTGGCGGTGAAAGTGGTGGTGGTGGTGGTGATGGTGGGAGTAGTGGTGATGATGATCGTGATGATAATACTACCACCACCAGTCACGGCGGCGGCGGTGGTGGTGGTGGTGAGAACATGATTATGTCTGTTAGTACGGTGATGAATATTTGTCATCCTGGTGGTGGTGATCATGTGAACGTCATGCAATGGGGAGGCAGCAACACGCTCTCCTCCTCTCGCACTAATGCAAATAATAATAATAATAATTACTGA 912 0.545 MADHGGITMSLSHTSDDSSSDQHPTQGGGGGSVVGSSSHHRRLTTPCSPTTTTTFHQALALPPHKKPRGRPPGSKNKPKPPVVITKDSSEESLKPVVIEVATGSDILEAVVTFARRRNVGISVLSGSGTIGSVTLRHPYSHAPALTLHGPFTLLTFTGSYITHNSSSSSSSSSVCSSFAVSFSGSQGQIFGGVVAGSLIAATSVMIVASVFKKPVEIHRIGGESGGGGGDGGSSGDDDRDDNTTTTSHGGGGGGGGENMIMSVSTVMNICHPGGGDHVNVMQWGGSNTLSSSRTNANNNNNNY* 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g1782 303 MobiDBLite consensus disorder prediction 281 303 - -
Aev03g1782 303 ProSiteProfiles PPC domain profile profile. 90 232 IPR005175 -
Aev03g1782 303 SUPERFAMILY AF0104/ALDC/Ptd012-like 92 212 - -
Aev03g1782 303 MobiDBLite consensus disorder prediction 1 89 - -
Aev03g1782 303 Gene3D - 93 224 - -
Aev03g1782 303 MobiDBLite consensus disorder prediction 8 58 - -
Aev03g1782 303 MobiDBLite consensus disorder prediction 219 258 - -
Aev03g1782 303 PIRSF ESCAROLA 3 295 IPR014476 GO:0003680
Aev03g1782 303 Pfam Plants and Prokaryotes Conserved (PCC) domain 94 212 IPR005175 -
Aev03g1782 303 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 10 287 IPR014476 GO:0003680
Aev03g1782 303 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 10 287 - -
Aev03g1782 303 CDD DUF296 94 209 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g1782 Aev-Chr3 19929406 19930317 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g1782 65 278 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 40.724 1.06e-44 151
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g1782 - - ahf:112712816 211.846