Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g1755 ATGTCAACCAGAAAGACGGCGAGAGGTAGAGACCACCGTAACAATCGTGCACCTCACAAGGACGACGACTCCTTCACAGCAAAGGCTCTACACCCATCCACCACCACTCCACGGTGGACCAGCAACCAAGCGCAACACCATAATCAACACCCCAAATTCCGCTTCGTCAAGAAATCTGACCCGCCTTCTCCTTCTCCTGATTCTGCTGATAAGGCCACTCCAACGCCGCCACATGAGAATCTCCGAGAAGACAACAACCGTGGCTCCGAATCGAACGCTTTTGTTGGTGATGATATTGAAATAGTGCTGGAGGAGAAGATCGATCACGGGGATAGTTCGAGAAACACCGAGGAAGATCATGATGATGGCGGTGATGTTGTGGGTAGACTTGATAGGTTGCTCTCTAGTTTGGAAGAGCCTGAATTGTCTCAAGAGCAACTTAGAATCAATGACCAGTTGCAGGAAGATGAGTTACTTGTGGTGGAGTCAATTTACGGAGAAAATGTTACCAAGCTTGAGAGATGGAAAGGCCTGCGATGTTTTCAGATACAAGTACACATTGAAGTCTTGGATGGAATTCCCATTACTGCTAATCTGAACTCTTCCAATGAAATTGAGTCCGTAAGCGACAACTCGGATGAGTTCTTATACTCTTTCGAAGTCCAATATCTTCCACCGATTGTTTTGACATGTTTATTGCCAAAGTCATACCCAAGCCACCAACCACCTATATTTACAATCTCTGTTCAGTGGTTGGAATCCTTAAATATTTCAAGTCTATGCTCTCAGTTGGACTCTATATGGGCAGAGCAGCAAGGGATGGAAGTAATCTACCAATGGGTAGAATGGTTACATGGTTCTTCTCTTTCCCATATGGGATTTGATAAGGAAATTACACTTGGTATTAATGGCTTGAATCATGTTGAAGATGAGCGTGTTGTTCCAGGAACTATATCCCTTGATGCTGTTATTCCGTTTTTGCGAAGTTACAACAATGAGAGACACAATGAAAACTTCCTCAAAGAATTACATGATTGTTGCATTTGCTACAGTGAATATCCAGGTACTGAGTTTGTCCAGTTACCATGTAAGCATTATTTTTGCTTGAAATGCTTGCAGACGTTTACTCAGATGCATGTAAAAGAAGGCACCATTAGTAACCTTCAATGTCCTGATACAAAATGTACGGTTATGATTCCACCTGGTCTTTTAAAACACTTGCTTGGCGATGAAGAGTATGAACGCTGGGAATCCATGATGCTCGAGAGAACACTTGCATCAATGTCTGATGTTTTTTATTGCCCAAGGTGTGAAACACCTTGTGTAGAGGATGAAGACCAGCATGCTCAATGCTCAAAATGCTTTTTTAGCTTTTGTACCCTTTGTAGGGAACGGCGCCATGTTGGCATATCATGCATGTCACTAGATATGAAGCTTCAAATTTTGCAGGACCGTCAAAATTCATCTCACTTAAAGGAAGATCAAAAGCAAAGGGAGCGGGAAAAGATCAATGAAATGCTCAGTATGAAAGAAATTCATCGTGATTCTAAGTTGTGCCCTTCTTGTGCCATGGCAATCAATCGTATTGAAGGTTGTAATAAGATGAAGTGTAGTAATTGTGGACAGTATTTTTGTTACCGCTGCAACAAAGCAATTGATGCATCAGATCCATATGGACATTTCAGGGACGGGTCGTGCGAATTGTTCCCGCAAGAAATGGTTGAGAACTGGCAAGAGCGCATAAACCATCGCCAGGTGGTAGGACAATTGCAGGCTGAACTCTTTCCTCAACGTGGCCTTCCATGCCCTAACTGTCGGCAATTCAATGCAAAGATTGGAAACAATAATCACATGTTTTGCTGGGCGTGCCAAAGCCATTACTGCTACTTGTGCAACCAGATCGTGAGGCGCGGCACAAAGCATTATGGACCAAAGGGTTGCAAACAGCATTCTGAGGGATGA 1962 0.4343 MSTRKTARGRDHRNNRAPHKDDDSFTAKALHPSTTTPRWTSNQAQHHNQHPKFRFVKKSDPPSPSPDSADKATPTPPHENLREDNNRGSESNAFVGDDIEIVLEEKIDHGDSSRNTEEDHDDGGDVVGRLDRLLSSLEEPELSQEQLRINDQLQEDELLVVESIYGENVTKLERWKGLRCFQIQVHIEVLDGIPITANLNSSNEIESVSDNSDEFLYSFEVQYLPPIVLTCLLPKSYPSHQPPIFTISVQWLESLNISSLCSQLDSIWAEQQGMEVIYQWVEWLHGSSLSHMGFDKEITLGINGLNHVEDERVVPGTISLDAVIPFLRSYNNERHNENFLKELHDCCICYSEYPGTEFVQLPCKHYFCLKCLQTFTQMHVKEGTISNLQCPDTKCTVMIPPGLLKHLLGDEEYERWESMMLERTLASMSDVFYCPRCETPCVEDEDQHAQCSKCFFSFCTLCRERRHVGISCMSLDMKLQILQDRQNSSHLKEDQKQREREKINEMLSMKEIHRDSKLCPSCAMAINRIEGCNKMKCSNCGQYFCYRCNKAIDASDPYGHFRDGSCELFPQEMVENWQERINHRQVVGQLQAELFPQRGLPCPNCRQFNAKIGNNNHMFCWACQSHYCYLCNQIVRRGTKHYGPKGCKQHSEG* 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g1755 653 Gene3D Ubiquitin Conjugating Enzyme 143 292 IPR016135 -
Aev03g1755 653 ProSiteProfiles RWD domain profile. 156 291 IPR006575 GO:0005515
Aev03g1755 653 MobiDBLite consensus disorder prediction 28 49 - -
Aev03g1755 653 SUPERFAMILY UBC-like 150 285 IPR016135 -
Aev03g1755 653 PANTHER RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING 125 593 IPR031127 GO:0004842|GO:0016567
Aev03g1755 653 PANTHER RBR-TYPE E3 UBIQUITIN TRANSFERASE 125 593 - -
Aev03g1755 653 ProSiteProfiles TRIAD supradomain profile. 342 571 IPR044066 -
Aev03g1755 653 ProSiteProfiles Zinc finger RING-type profile. 346 394 IPR001841 -
Aev03g1755 653 SMART ibrneu5 414 472 IPR002867 -
Aev03g1755 653 SMART ibrneu5 501 566 IPR002867 -
Aev03g1755 653 Gene3D - 488 595 - -
Aev03g1755 653 SUPERFAMILY RING/U-box 414 476 - -
Aev03g1755 653 MobiDBLite consensus disorder prediction 99 127 - -
Aev03g1755 653 SMART ring_2 346 393 IPR001841 -
Aev03g1755 653 SMART ring_2 602 631 IPR001841 -
Aev03g1755 653 SMART ring_2 434 522 IPR001841 -
Aev03g1755 653 SUPERFAMILY RING/U-box 597 650 - -
Aev03g1755 653 MobiDBLite consensus disorder prediction 1 127 - -
Aev03g1755 653 SUPERFAMILY RING/U-box 341 426 - -
Aev03g1755 653 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 341 429 IPR013083 -
Aev03g1755 653 MobiDBLite consensus disorder prediction 1 27 - -
Aev03g1755 653 SMART RWD2001b 156 291 IPR006575 GO:0005515
Aev03g1755 653 Pfam IBR domain, a half RING-finger domain 414 472 IPR002867 -
Aev03g1755 653 Pfam IBR domain, a half RING-finger domain 509 552 IPR002867 -
Aev03g1755 653 Pfam RWD domain 152 285 IPR006575 GO:0005515
Aev03g1755 653 ProSitePatterns Zinc finger RING-type signature. 363 372 IPR017907 -
Aev03g1755 653 SUPERFAMILY RING/U-box 505 561 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g1755 341 574 ARIADNE family AT3G27710 25.207 4.57e-15 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g1755 K11971 - gmx:100500662 919.842