Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g1748 ATGACTTTCAAGCGCAGGAATGGAGGAAGAAACAAGCATGGCCGTGGCCATGTTAAATTCATCCGCTGCTCCAACTGCGGCAAGTGCTGCCCCAAGGACAAGTCAATTAAGCGGTTCCTTGTTAGGAACATTGTCGAACAGGCTGCAGTTCGTGATGTTCAGGAGGCCTGTGTCTATGAGCAATACACACTTCCAAAGCTGTATGTGAAGATGCAGTACTGCGTCTCTTGTGCCATCCATTCTCACGTTGTGAGGGTGCGTTCTCGCACTGATAGGAGGAACCGTGAGCCTCCACAGCGCTTTGCTAGGCGCAGGGATGACGCTCCAAGACCCGGTCAGCCTGGTCAAGCTCCTCGTGCCGCCGGAGCAGCTCCTGCTCGTGCCTAA 387 0.5426 MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKSIKRFLVRNIVEQAAVRDVQEACVYEQYTLPKLYVKMQYCVSCAIHSHVVRVRSRTDRRNREPPQRFARRRDDAPRPGQPGQAPRAAGAAPARA* 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g1748 128 PANTHER 40S RIBOSOMAL PROTEIN S26 1 127 - -
Aev03g1748 128 PANTHER 40S RIBOSOMAL PROTEIN S26 1 127 IPR000892 GO:0003735|GO:0005840|GO:0006412
Aev03g1748 128 Pfam Ribosomal protein S26e 1 106 IPR000892 GO:0003735|GO:0005840|GO:0006412
Aev03g1748 128 Gene3D Ribosomal protein S26e 1 114 IPR038551 -
Aev03g1748 128 ProSitePatterns Ribosomal protein S26e signature. 73 80 IPR000892 GO:0003735|GO:0005840|GO:0006412
Aev03g1748 128 MobiDBLite consensus disorder prediction 89 110 - -
Aev03g1748 128 MobiDBLite consensus disorder prediction 85 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g1748 Aev-Chr3 19539803 19542367 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g1748 1 116 Cytoplasmic Ribosomal Protein Gene Family AT3G56340 84.483 2.91e-70 205
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g1748 K02976 - gmx:100305706 196.823