Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g1733 ATGATACCGATGGATCCATGGTACAGAGGATTCAAAGGAGTCATTGAGAAAAGGGCCAAGGAAGGTGGCTATATATTCAATGGTACAGTAGAGGAAATAAATGAACAAACTTTCAGGATCACTGAGCTGCCTATTCGTAGATGGACTCAAGATTATAAGCAGTTCCTTGAATCTATAATAGATGGTTCACCTAATGTCAAGGATCCTCTCATTGAGGATTTCAGGCAGAATGGTGATGATGCTGTTGTAGACATCGAAATCAGGTTGAAGCTGGACATCAAAATCAGGTTGAAGCTGGACAAAGTAGCCATGGTCATGCAAGAGGGCCTGTTAAAGAAATTCAAAATGACTAACACTATCAGCACGATCCTTGAAGAGTTCTTTCCTCTTCGGCTGGAGTATTATGAGAAGAGGAAGCTTCAATTCCATGTGGCTAACCATGGATTGAGGAGTTGGACCCGTGTCATCACTATCTTCCGGGTCATGTTCAAGGAGCTGCAGCAGAAAGGCTTCACTCCCATGCCAGAGAAGGGTAAATCCGCAGTGCTGCAAGTTGCTGGGGCAGCCGATGATGTCTCAGAAGAGCAGGAAGACGATGCCAATAGAGAGCAGGAAACTGCCAGTGATGACAAGGAAAAGGAGTTTGAGATCCTGAAGGCGACACCACCAACGACCATGTGGATGAATGATCTTGATGAGCTTGAGAAGAAGCTTGATGAAATAGATAGCAAAGAGGCGGAGGAGGAGCAAAAGAGGTCATGTCAAGCAACTAAAAAGACATCTAATCAAGCAGGGAAGAAGGCACCACAACCCAGAAAGTATGCTAAGAAGGCCAAAAATGTTGAGCCAGAGAATGATAATTCTTCGATGGAAATTGAGAATCCTTTTGAGGTTGATGACGACGAAATTTTGTCTCTTCAAGAACGACTAGCTGCATATATCTTTGGAGCATCCAGTGATCATTCAGCAGCCATGGAAGCCGAAAAGCCCCCGGTACCTGCTGGGAAGAAAGAGACTATTAAACGTGGTGGTGGTGCGAAAAAGAAATCTTCAAAAACAATCGTGTTGGACTCATCTGATAGTGATAATAATGGTGCCATCAATGATGAGGATGACGATGATGACGACTTTGAGGTATTAGAGCAGGCTGCAGCAGGGAAAGAGAAGGGTGGAAGAATACCTGCTGCTCAAAATGCCAAGGCAGCAGCAACAAAGAAGAGAAATAACCCAGCTGAAGGTTCAGGGATTTCACCACAGAAGAAAGTGAGGAGGATGAGGGTATCGTCATCCAACAAGAAGAGTAGCTCTGTTCTGAGCAGGGTTGCTGTTGACAAAGATGAATCCACAAGTGAAGACTTATCCGGTTCGGCAGCGGGTTTGGCTTCTAATTCTCCTGGTCTGGAGGATGAGGTGGTTGAGATTGCACCAGCAGCAGCAACAAGAGCAGACCACAGAGGGCCAACTGCACTCAAGCAAGATACATTCTCTGAGCACTATTTTACTCTTCCACTCTCTCTGTCTCGTTTCTTTCCCAAACCACAACTAAGGAAGATGAAAAGGCTCCCATATGGAAACTTGAGTGGAGAAGGATTATATTGGCTGAGGGCTCATCACTTCAAGCATGACCATGATCGAGAGACTCAGGCTGTGATTAGACTGAAGGCTAAGCAGAGATGGGTTGACAGAGGGATGCCAGTACATAACAGTTCTATGGATTTGTTCTCCATGATGGCGTTCTTGCATTTTGTTTCATTCTCGCTAGAGGACTACTAG 1773 0.4512 MIPMDPWYRGFKGVIEKRAKEGGYIFNGTVEEINEQTFRITELPIRRWTQDYKQFLESIIDGSPNVKDPLIEDFRQNGDDAVVDIEIRLKLDIKIRLKLDKVAMVMQEGLLKKFKMTNTISTILEEFFPLRLEYYEKRKLQFHVANHGLRSWTRVITIFRVMFKELQQKGFTPMPEKGKSAVLQVAGAADDVSEEQEDDANREQETASDDKEKEFEILKATPPTTMWMNDLDELEKKLDEIDSKEAEEEQKRSCQATKKTSNQAGKKAPQPRKYAKKAKNVEPENDNSSMEIENPFEVDDDEILSLQERLAAYIFGASSDHSAAMEAEKPPVPAGKKETIKRGGGAKKKSSKTIVLDSSDSDNNGAINDEDDDDDDFEVLEQAAAGKEKGGRIPAAQNAKAAATKKRNNPAEGSGISPQKKVRRMRVSSSNKKSSSVLSRVAVDKDESTSEDLSGSAAGLASNSPGLEDEVVEIAPAAATRADHRGPTALKQDTFSEHYFTLPLSLSRFFPKPQLRKMKRLPYGNLSGEGLYWLRAHHFKHDHDRETQAVIRLKAKQRWVDRGMPVHNSSMDLFSMMAFLHFVSFSLEDY* 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g1733 590 Gene3D - 11 123 - -
Aev03g1733 590 Gene3D - 535 590 IPR038718 -
Aev03g1733 590 SUPERFAMILY Type II DNA topoisomerase 2 245 IPR013760 GO:0003918|GO:0005524
Aev03g1733 590 Coils Coil 231 251 - -
Aev03g1733 590 MobiDBLite consensus disorder prediction 331 345 - -
Aev03g1733 590 Gene3D Topoisomerase, domain 3 159 253 IPR013757 GO:0003677|GO:0003918|GO:0005524
Aev03g1733 590 PANTHER DNA TOPOISOMERASE/GYRASE 1 336 - -
Aev03g1733 590 MobiDBLite consensus disorder prediction 364 379 - -
Aev03g1733 590 MobiDBLite consensus disorder prediction 243 296 - -
Aev03g1733 590 MobiDBLite consensus disorder prediction 204 218 - -
Aev03g1733 590 MobiDBLite consensus disorder prediction 429 443 - -
Aev03g1733 590 PRINTS Topoisomerase II signature 40 54 IPR001154 GO:0003677|GO:0003918|GO:0005524|GO:0006265
Aev03g1733 590 PRINTS Topoisomerase II signature 112 138 IPR001154 GO:0003677|GO:0003918|GO:0005524|GO:0006265
Aev03g1733 590 PANTHER DNA TOPOISOMERASE 2 1 336 - -
Aev03g1733 590 Pfam DNA gyrase/topoisomerase IV, subunit A 2 148 IPR002205 GO:0003677|GO:0003918|GO:0005524|GO:0006265
Aev03g1733 590 MobiDBLite consensus disorder prediction 174 230 - -
Aev03g1733 590 SMART topIV4 1 262 IPR002205 GO:0003677|GO:0003918|GO:0005524|GO:0006265
Aev03g1733 590 MobiDBLite consensus disorder prediction 322 465 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g1733 Aev-Chr3 19407541 19417895 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g1733 533 590 RAD5 or RAD16-like Gene Family AT5G05130 42.857 9.99e-11 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g1733 K03164 - gmx:100796974 502.671