Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g1728 ATGGAAAATGAGGTAGCAACATCAACAAATAGTGAAGAAGGCCAATCTATAAGATGCAAAGCTGCGGTTGCTAGAGGAGCGGGCGAGGCATTGGTGATTGAGGAAATAATAGTGGCGCCGCCGAAACGTCGTGAAGTTCGGATTCGTGTCATTTGTACCTCTCTCTGCGGCAGCGATGCCACTTTTTGGAAAATGCAGGATCCTCCAGCATATTTTCCTAGAATTCTTGGCCATGAGGCAGTTGGTGTTGTGGAAAGTGTAGGAGAAGATGTGAGTGAAGTTAGAAAAGGAGATTTGGTGATTCCAATATTTCTACCAGATTGTGGGGAATGTGTGGATTGTGAATCAAGCAAGAGCAACCGTTGTACCAATTTTCCATTTGAGGTATCCCCTTGGATGCCAAGAGATGGTACCTCAAGATTCACTGATTCAAATGGAGAGATCATACACCATTTCATGTTCATTTCAAGCTTCAGTGAGTACACTGTGGTTGACATTGCCAACATTACAAAGATTGACCCTCAAATTCCACCTCACAGGGCATGCCTTCTTGGTTGTGGTGTATCAACTGGGGTAGGTGCTGCTTGGAGAACAGCAGGTGTGGAGCCAGGGTCTACAGTAGCTATTTTTGGGCTGGGATCTATTGGATTTGCAGTTGCTGAGGGAGCTAGACTTTGTGGAGCAACTAGGATTATAGGTGTGGATGTCAACCCAGAAAAATTTGAAATTGGGAAAAAGTTTGGAGTGACAGAGTTTGTTCATCCTGGAGAATGTGGAAACAAAGCAGTGAGTGAGGTTATCATAGAGAAAACTGGTGGAGGAGCAGATTATTGCTTTGAATGTGTTGGTATGGCATCAGTGGTGCATCAAGCTTTTGCTTCTTGTCGAATGGGATGGGGAAAAACAATTGTTGTAGGAGTGGACAAGCCAGGAGCCAGGTTGAGCCTTAGTTCTTATGAGGTCCTTCATGATGGGAAAACTCTCATGGGATCCTTATTTGGAGGACTCAAACCCAAATCTCATGTTCCCATTCTCCTTCAGAGGTACATGGACAAGGAACTGCAATTGGATGAGTTTGTGACTCATGAGGTTGAGTTTAAGGACATCAATAAAGCATTTGATTTATTGAACCAAGGGAAGAGTCTGCGATGTGTGATTTGGATGGATACAAAATGA 1176 0.4396 MENEVATSTNSEEGQSIRCKAAVARGAGEALVIEEIIVAPPKRREVRIRVICTSLCGSDATFWKMQDPPAYFPRILGHEAVGVVESVGEDVSEVRKGDLVIPIFLPDCGECVDCESSKSNRCTNFPFEVSPWMPRDGTSRFTDSNGEIIHHFMFISSFSEYTVVDIANITKIDPQIPPHRACLLGCGVSTGVGAAWRTAGVEPGSTVAIFGLGSIGFAVAEGARLCGATRIIGVDVNPEKFEIGKKFGVTEFVHPGECGNKAVSEVIIEKTGGGADYCFECVGMASVVHQAFASCRMGWGKTIVVGVDKPGARLSLSSYEVLHDGKTLMGSLFGGLKPKSHVPILLQRYMDKELQLDEFVTHEVEFKDINKAFDLLNQGKSLRCVIWMDTK* 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g1728 391 Pfam Alcohol dehydrogenase GroES-like domain 44 171 IPR013154 -
Aev03g1728 391 Gene3D - 191 331 - -
Aev03g1728 391 SUPERFAMILY GroES-like 339 387 IPR011032 -
Aev03g1728 391 Pfam Zinc-binding dehydrogenase 215 335 IPR013149 -
Aev03g1728 391 Gene3D - 22 383 - -
Aev03g1728 391 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 176 351 IPR036291 -
Aev03g1728 391 SUPERFAMILY GroES-like 13 197 IPR011032 -
Aev03g1728 391 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 77 91 IPR002328 GO:0008270|GO:0016491
Aev03g1728 391 PANTHER ALCOHOL DEHYDROGENASE-LIKE 7 12 387 - -
Aev03g1728 391 PANTHER ALCOHOL DEHYDROGENASE 12 387 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g1728 Aev-Chr3 19362348 19367218 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g1728 43 160 Monolignol Biosynthesis Gene Families AT4G39330 25.210 2.36e-08 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g1728 K00121 - gmx:100817521 658.677