Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g1723 ATGTCGGGACGAGGTGGAAGGGAAAGGATTAGGAGGGATTACCCTTCAAGATACAGTGATAAGGGTGGTGGCGGTGGCGGTGGTGGACGTGGGGGCAGCAGCAGCAACAACCCCCCGTCGAGGCACCTTTGGGTTGGGAACCTGTCCCACAACATTGTGGAGGAGGATGAGCTTGCCCATCACTTCTTACAGTTTGGGCCGCTGGAGAGTGTTGCATTCCAGCCGAGCCGCAGCTATGCGTTCATCAACTTCAAGAGGGACGAGGATGCCATTGATGCCATGAGAGAACTTCAAGGATTTCCCCTTGCCGGCAACCCGCTTAGGATCGAGTTTGCTAAGGCGGATAAGCCAGTGGCAACATCATGTGATGAACATTACCCACGGGATGAACGAAGCTTGCCATTTAGGGGATCTCCTTTCTCACAAAGGGAATTTCGAGGACGCCATAGTAGCCCCCCTGAACCACTTTATTCTGACAAATCCAAGCCGAGAGATAAAAATCCAGAGCCCAGTGAAATATTGTGGATTGGATTCCCTGCTCAGCTGAAGGTGGATGAATTTGTTTTAAGAAAGGCCTTTTCACCATTTGGTGAGATTGTGAAGATTACTACATTTCCAGGTCGAAGTTATGCCTTTGTTCGCTTTCGGAATGTGATGTCAGCAGGCCGAGCAAGAGATGCTCTGAAAGGAAAGTTATTTGGGAATCCCCGTGTACATATTTGTTTTGCTAAGAGTGAAGCTGGTTCATCAGGCAGTGGTAGGAGTTCATTTAATGCCCCTCATTCCCCAAGTTATAGGTCAAGTGGTCGTGAAGGATCTCCAGAGAACATGAGGCAGGATGGGAGCTTCATTGGAGATCACTACACTAGTTCTCCAAACGTTTTTCCGAATTGGGCTCCTGGAGATTCTGATGCTTATGATTTTGACAGAAGGGGTCCTTCATGGGCTGGTGGAACAAACACATACGAGCAAAGGAAAGTTGCAGAGAAGGGGACTCCACCAGGTTTTGGAGCTTCACATGAAATGTATGAATATATGAATACTCCTTCAAGAGAAAGACATGTCCATCCCGGTGATTTACTACATAGGTTTCCTGAAAAGGGTGCTGCATTCTTTGACGTTCCGCAGGCCTTGCCAGAAGATGTTCACTATGTACGTGAGGCTAAGAAGCTAAAGACTGCTTCTTCTCCCCCCGAGAGAGAGCTTCCAGAGTATCCTTTCTCTGAGCTAGAAAGACAGAAAGGTTTTATCCCACGGATATTGCCGGAATTTTCCCAACGCGAGCCTTTTAATAATGATACTGGAAATGCTGCCTATAGACAGACCCTTGATCACCCACCAAATTCACCTATGGCTTATTTAGACCGACGTGAAGGCTTGATACCTTACGATAGTTTTCAAAAGGGTCCTGGTGATCTGCATTCAAATTATGCAAAGAAAAGATTTACACCTGAACCTGAGCATTCATCTATAGCCGAGTGGAGATGGGAAGGAACCATTGCTAAGGGTGGAACCCCTGTTTGTCGAGCACGCTGCTTTCCTGTGGGGAAAGTCCTAGATATGATGTTACCTGAATTCTTGGATTGCACTGCAAGAACTGGTTTGGACATGCTTTCAAAGCATTACTACCAAGCAGTTGGTGTATGGGTTGTGTTTTTCGTGCCCGGAAGCGATGCTGACATTGAATTCTACAATGAATTCATGCATTATCTGGAGGAAAAGCAGCGAGCTGCCGTTGCCAAGTTGGATGACAAGACCACCTTATTTCTTGTACCTCCATCAGATTTCTCAGAGAAAGTGTTGAAGGTACCTGGGAAATTGAGCATATCTGGTGTCATTCTAAGGCTGGAGAATCCTGCTTTTAATCATGGCCCCGTACATATTCAAACAGAACCGAAAAACGAGAATCTGTTGCCCTATAATGAGAATATGATAATGTATTCAAAGCCATCATTTCCACCAGCACGCGTTCCTTCTTCTGCATCAATTTCAGAATTCGGTAATTCTGGAGTCAGCAATAATTCTTTTCTGGGAAACAAGTTTGCACCATCTCCATCAGTTTCAGCGGTTAGCTTGCCGGAGCCTAGGGATGAAAGAGGCCGTGACTGTCCTCCTTTCCAGCAGCAGAACTACCCTACATCTGGACCAAACTGGTCCGGTCACAATCTGCAGAACTCAATCTCAGCTAGAACGTTACCACCACAACTATTAGGCGGTGCTGTTGAGCCTGTTGCCGAGGATCGCCAGGTCATGATTCCAAGGGTTGAACCAGATGCAAGACCTTTAAATCCTTTATCTCTGCCTGTGGGAGCTCTGCAACCAGAACAGCTTGCACAACTAGCTGCATCTCTTCTTGAACAGAAGAGGCAAGCAGGAAGCTCTTTCAGTGCTTCTTCTTCGAATGATCCTAGGCAGACCAACAGATTGAACGTGTCCGAAAGTTCATCCTTACCGCCACAGACATACGGTGCAGAAAACCTGGTGAATTCTGAACACCCAGCATCTCAGTTTGGTCAAGTTCTACAGTTGAAAAAGCAACAGCAGATGTCAAATGTGCCTCAATCGTCGCAGATGATTCAAAGAGAACCACAAAGAGGGGCTAATGCGAATCAGCAGATTATGGATAGTAGCAGTTTGCAGGAAGATGCCGAAGCAGATCCGCAGAAACGTCTTCAAGCGACCTTACAGTTAGCTGCTGTTCTTATTCAGCAAATCCAGCAAGGACAAGGAAGCTAA 2736 0.4667 MSGRGGRERIRRDYPSRYSDKGGGGGGGGRGGSSSNNPPSRHLWVGNLSHNIVEEDELAHHFLQFGPLESVAFQPSRSYAFINFKRDEDAIDAMRELQGFPLAGNPLRIEFAKADKPVATSCDEHYPRDERSLPFRGSPFSQREFRGRHSSPPEPLYSDKSKPRDKNPEPSEILWIGFPAQLKVDEFVLRKAFSPFGEIVKITTFPGRSYAFVRFRNVMSAGRARDALKGKLFGNPRVHICFAKSEAGSSGSGRSSFNAPHSPSYRSSGREGSPENMRQDGSFIGDHYTSSPNVFPNWAPGDSDAYDFDRRGPSWAGGTNTYEQRKVAEKGTPPGFGASHEMYEYMNTPSRERHVHPGDLLHRFPEKGAAFFDVPQALPEDVHYVREAKKLKTASSPPERELPEYPFSELERQKGFIPRILPEFSQREPFNNDTGNAAYRQTLDHPPNSPMAYLDRREGLIPYDSFQKGPGDLHSNYAKKRFTPEPEHSSIAEWRWEGTIAKGGTPVCRARCFPVGKVLDMMLPEFLDCTARTGLDMLSKHYYQAVGVWVVFFVPGSDADIEFYNEFMHYLEEKQRAAVAKLDDKTTLFLVPPSDFSEKVLKVPGKLSISGVILRLENPAFNHGPVHIQTEPKNENLLPYNENMIMYSKPSFPPARVPSSASISEFGNSGVSNNSFLGNKFAPSPSVSAVSLPEPRDERGRDCPPFQQQNYPTSGPNWSGHNLQNSISARTLPPQLLGGAVEPVAEDRQVMIPRVEPDARPLNPLSLPVGALQPEQLAQLAASLLEQKRQAGSSFSASSSNDPRQTNRLNVSESSSLPPQTYGAENLVNSEHPASQFGQVLQLKKQQQMSNVPQSSQMIQREPQRGANANQQIMDSSSLQEDAEADPQKRLQATLQLAAVLIQQIQQGQGS* 912
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g1723 911 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 41 114 IPR000504 GO:0003723
Aev03g1723 911 SUPERFAMILY RNA-binding domain, RBD 183 272 IPR035979 GO:0003676
Aev03g1723 911 MobiDBLite consensus disorder prediction 684 725 - -
Aev03g1723 911 MobiDBLite consensus disorder prediction 1 42 - -
Aev03g1723 911 SMART rrm1_1 173 241 IPR000504 GO:0003723
Aev03g1723 911 SMART rrm1_1 42 110 IPR000504 GO:0003723
Aev03g1723 911 CDD RRM3_Spen 43 113 - -
Aev03g1723 911 MobiDBLite consensus disorder prediction 841 888 - -
Aev03g1723 911 PANTHER RNA-BINDING PROTEIN SPENITO 27 900 - -
Aev03g1723 911 SUPERFAMILY RNA-binding domain, RBD 27 117 IPR035979 GO:0003676
Aev03g1723 911 MobiDBLite consensus disorder prediction 248 275 - -
Aev03g1723 911 MobiDBLite consensus disorder prediction 1 18 - -
Aev03g1723 911 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 43 107 IPR000504 GO:0003723
Aev03g1723 911 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 185 237 IPR000504 GO:0003723
Aev03g1723 911 MobiDBLite consensus disorder prediction 246 286 - -
Aev03g1723 911 MobiDBLite consensus disorder prediction 706 725 - -
Aev03g1723 911 MobiDBLite consensus disorder prediction 791 825 - -
Aev03g1723 911 Gene3D - 31 120 IPR012677 -
Aev03g1723 911 Gene3D - 158 251 IPR012677 -
Aev03g1723 911 PANTHER RNA RECOGNITION MOTIF-CONTAINING 27 900 - -
Aev03g1723 911 MobiDBLite consensus disorder prediction 841 881 - -
Aev03g1723 911 Pfam SPOC domain 489 604 IPR012921 -
Aev03g1723 911 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 171 245 IPR000504 GO:0003723
Aev03g1723 911 MobiDBLite consensus disorder prediction 147 169 - -
Aev03g1723 911 MobiDBLite consensus disorder prediction 120 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g1723 Aev-Chr3 19288371 19299363 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g1723 31 258 Eukaryotic Initiation Factors Gene Family AT4G34110 23.750 2.96e-08 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g1723 - - gmx:100811668 1105.89