Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aev03g1723 | ATGTCGGGACGAGGTGGAAGGGAAAGGATTAGGAGGGATTACCCTTCAAGATACAGTGATAAGGGTGGTGGCGGTGGCGGTGGTGGACGTGGGGGCAGCAGCAGCAACAACCCCCCGTCGAGGCACCTTTGGGTTGGGAACCTGTCCCACAACATTGTGGAGGAGGATGAGCTTGCCCATCACTTCTTACAGTTTGGGCCGCTGGAGAGTGTTGCATTCCAGCCGAGCCGCAGCTATGCGTTCATCAACTTCAAGAGGGACGAGGATGCCATTGATGCCATGAGAGAACTTCAAGGATTTCCCCTTGCCGGCAACCCGCTTAGGATCGAGTTTGCTAAGGCGGATAAGCCAGTGGCAACATCATGTGATGAACATTACCCACGGGATGAACGAAGCTTGCCATTTAGGGGATCTCCTTTCTCACAAAGGGAATTTCGAGGACGCCATAGTAGCCCCCCTGAACCACTTTATTCTGACAAATCCAAGCCGAGAGATAAAAATCCAGAGCCCAGTGAAATATTGTGGATTGGATTCCCTGCTCAGCTGAAGGTGGATGAATTTGTTTTAAGAAAGGCCTTTTCACCATTTGGTGAGATTGTGAAGATTACTACATTTCCAGGTCGAAGTTATGCCTTTGTTCGCTTTCGGAATGTGATGTCAGCAGGCCGAGCAAGAGATGCTCTGAAAGGAAAGTTATTTGGGAATCCCCGTGTACATATTTGTTTTGCTAAGAGTGAAGCTGGTTCATCAGGCAGTGGTAGGAGTTCATTTAATGCCCCTCATTCCCCAAGTTATAGGTCAAGTGGTCGTGAAGGATCTCCAGAGAACATGAGGCAGGATGGGAGCTTCATTGGAGATCACTACACTAGTTCTCCAAACGTTTTTCCGAATTGGGCTCCTGGAGATTCTGATGCTTATGATTTTGACAGAAGGGGTCCTTCATGGGCTGGTGGAACAAACACATACGAGCAAAGGAAAGTTGCAGAGAAGGGGACTCCACCAGGTTTTGGAGCTTCACATGAAATGTATGAATATATGAATACTCCTTCAAGAGAAAGACATGTCCATCCCGGTGATTTACTACATAGGTTTCCTGAAAAGGGTGCTGCATTCTTTGACGTTCCGCAGGCCTTGCCAGAAGATGTTCACTATGTACGTGAGGCTAAGAAGCTAAAGACTGCTTCTTCTCCCCCCGAGAGAGAGCTTCCAGAGTATCCTTTCTCTGAGCTAGAAAGACAGAAAGGTTTTATCCCACGGATATTGCCGGAATTTTCCCAACGCGAGCCTTTTAATAATGATACTGGAAATGCTGCCTATAGACAGACCCTTGATCACCCACCAAATTCACCTATGGCTTATTTAGACCGACGTGAAGGCTTGATACCTTACGATAGTTTTCAAAAGGGTCCTGGTGATCTGCATTCAAATTATGCAAAGAAAAGATTTACACCTGAACCTGAGCATTCATCTATAGCCGAGTGGAGATGGGAAGGAACCATTGCTAAGGGTGGAACCCCTGTTTGTCGAGCACGCTGCTTTCCTGTGGGGAAAGTCCTAGATATGATGTTACCTGAATTCTTGGATTGCACTGCAAGAACTGGTTTGGACATGCTTTCAAAGCATTACTACCAAGCAGTTGGTGTATGGGTTGTGTTTTTCGTGCCCGGAAGCGATGCTGACATTGAATTCTACAATGAATTCATGCATTATCTGGAGGAAAAGCAGCGAGCTGCCGTTGCCAAGTTGGATGACAAGACCACCTTATTTCTTGTACCTCCATCAGATTTCTCAGAGAAAGTGTTGAAGGTACCTGGGAAATTGAGCATATCTGGTGTCATTCTAAGGCTGGAGAATCCTGCTTTTAATCATGGCCCCGTACATATTCAAACAGAACCGAAAAACGAGAATCTGTTGCCCTATAATGAGAATATGATAATGTATTCAAAGCCATCATTTCCACCAGCACGCGTTCCTTCTTCTGCATCAATTTCAGAATTCGGTAATTCTGGAGTCAGCAATAATTCTTTTCTGGGAAACAAGTTTGCACCATCTCCATCAGTTTCAGCGGTTAGCTTGCCGGAGCCTAGGGATGAAAGAGGCCGTGACTGTCCTCCTTTCCAGCAGCAGAACTACCCTACATCTGGACCAAACTGGTCCGGTCACAATCTGCAGAACTCAATCTCAGCTAGAACGTTACCACCACAACTATTAGGCGGTGCTGTTGAGCCTGTTGCCGAGGATCGCCAGGTCATGATTCCAAGGGTTGAACCAGATGCAAGACCTTTAAATCCTTTATCTCTGCCTGTGGGAGCTCTGCAACCAGAACAGCTTGCACAACTAGCTGCATCTCTTCTTGAACAGAAGAGGCAAGCAGGAAGCTCTTTCAGTGCTTCTTCTTCGAATGATCCTAGGCAGACCAACAGATTGAACGTGTCCGAAAGTTCATCCTTACCGCCACAGACATACGGTGCAGAAAACCTGGTGAATTCTGAACACCCAGCATCTCAGTTTGGTCAAGTTCTACAGTTGAAAAAGCAACAGCAGATGTCAAATGTGCCTCAATCGTCGCAGATGATTCAAAGAGAACCACAAAGAGGGGCTAATGCGAATCAGCAGATTATGGATAGTAGCAGTTTGCAGGAAGATGCCGAAGCAGATCCGCAGAAACGTCTTCAAGCGACCTTACAGTTAGCTGCTGTTCTTATTCAGCAAATCCAGCAAGGACAAGGAAGCTAA | 2736 | 0.4667 | MSGRGGRERIRRDYPSRYSDKGGGGGGGGRGGSSSNNPPSRHLWVGNLSHNIVEEDELAHHFLQFGPLESVAFQPSRSYAFINFKRDEDAIDAMRELQGFPLAGNPLRIEFAKADKPVATSCDEHYPRDERSLPFRGSPFSQREFRGRHSSPPEPLYSDKSKPRDKNPEPSEILWIGFPAQLKVDEFVLRKAFSPFGEIVKITTFPGRSYAFVRFRNVMSAGRARDALKGKLFGNPRVHICFAKSEAGSSGSGRSSFNAPHSPSYRSSGREGSPENMRQDGSFIGDHYTSSPNVFPNWAPGDSDAYDFDRRGPSWAGGTNTYEQRKVAEKGTPPGFGASHEMYEYMNTPSRERHVHPGDLLHRFPEKGAAFFDVPQALPEDVHYVREAKKLKTASSPPERELPEYPFSELERQKGFIPRILPEFSQREPFNNDTGNAAYRQTLDHPPNSPMAYLDRREGLIPYDSFQKGPGDLHSNYAKKRFTPEPEHSSIAEWRWEGTIAKGGTPVCRARCFPVGKVLDMMLPEFLDCTARTGLDMLSKHYYQAVGVWVVFFVPGSDADIEFYNEFMHYLEEKQRAAVAKLDDKTTLFLVPPSDFSEKVLKVPGKLSISGVILRLENPAFNHGPVHIQTEPKNENLLPYNENMIMYSKPSFPPARVPSSASISEFGNSGVSNNSFLGNKFAPSPSVSAVSLPEPRDERGRDCPPFQQQNYPTSGPNWSGHNLQNSISARTLPPQLLGGAVEPVAEDRQVMIPRVEPDARPLNPLSLPVGALQPEQLAQLAASLLEQKRQAGSSFSASSSNDPRQTNRLNVSESSSLPPQTYGAENLVNSEHPASQFGQVLQLKKQQQMSNVPQSSQMIQREPQRGANANQQIMDSSSLQEDAEADPQKRLQATLQLAAVLIQQIQQGQGS* | 912 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aev03g1723 | 911 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 41 | 114 | IPR000504 | GO:0003723 | |
Aev03g1723 | 911 | SUPERFAMILY | RNA-binding domain, RBD | 183 | 272 | IPR035979 | GO:0003676 | |
Aev03g1723 | 911 | MobiDBLite | consensus disorder prediction | 684 | 725 | - | - | |
Aev03g1723 | 911 | MobiDBLite | consensus disorder prediction | 1 | 42 | - | - | |
Aev03g1723 | 911 | SMART | rrm1_1 | 173 | 241 | IPR000504 | GO:0003723 | |
Aev03g1723 | 911 | SMART | rrm1_1 | 42 | 110 | IPR000504 | GO:0003723 | |
Aev03g1723 | 911 | CDD | RRM3_Spen | 43 | 113 | - | - | |
Aev03g1723 | 911 | MobiDBLite | consensus disorder prediction | 841 | 888 | - | - | |
Aev03g1723 | 911 | PANTHER | RNA-BINDING PROTEIN SPENITO | 27 | 900 | - | - | |
Aev03g1723 | 911 | SUPERFAMILY | RNA-binding domain, RBD | 27 | 117 | IPR035979 | GO:0003676 | |
Aev03g1723 | 911 | MobiDBLite | consensus disorder prediction | 248 | 275 | - | - | |
Aev03g1723 | 911 | MobiDBLite | consensus disorder prediction | 1 | 18 | - | - | |
Aev03g1723 | 911 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 43 | 107 | IPR000504 | GO:0003723 | |
Aev03g1723 | 911 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 185 | 237 | IPR000504 | GO:0003723 | |
Aev03g1723 | 911 | MobiDBLite | consensus disorder prediction | 246 | 286 | - | - | |
Aev03g1723 | 911 | MobiDBLite | consensus disorder prediction | 706 | 725 | - | - | |
Aev03g1723 | 911 | MobiDBLite | consensus disorder prediction | 791 | 825 | - | - | |
Aev03g1723 | 911 | Gene3D | - | 31 | 120 | IPR012677 | - | |
Aev03g1723 | 911 | Gene3D | - | 158 | 251 | IPR012677 | - | |
Aev03g1723 | 911 | PANTHER | RNA RECOGNITION MOTIF-CONTAINING | 27 | 900 | - | - | |
Aev03g1723 | 911 | MobiDBLite | consensus disorder prediction | 841 | 881 | - | - | |
Aev03g1723 | 911 | Pfam | SPOC domain | 489 | 604 | IPR012921 | - | |
Aev03g1723 | 911 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 171 | 245 | IPR000504 | GO:0003723 | |
Aev03g1723 | 911 | MobiDBLite | consensus disorder prediction | 147 | 169 | - | - | |
Aev03g1723 | 911 | MobiDBLite | consensus disorder prediction | 120 | 170 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aev03g1723 | Aev-Chr3 | 19288371 | 19299363 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aev03g1723 | 31 | 258 | Eukaryotic Initiation Factors Gene Family | AT4G34110 | 23.750 | 2.96e-08 | 55.5 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aev03g1723 | - | - | gmx:100811668 | 1105.89 |