Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g1716 ATGGCTGAAGCTTCAGTGATCATGTACAGCACCACTTTCCTCGCTGGTTTCACCTCCCCAATCCACAGAACCCATCTGGGTCTTTCTCAGCCTCACCCAACACCCCCTCTTCTTTCTCGCAAACCACACATTCTTCAGTGCTCAGCTCCTTCTGCAAGTGGTGGCGCCACCCAAATTTCGGCGGTGGAAGCCATCCCTTGGGGCTGCGAGGTTGACTCGTTGGAGAATGCTTCAGCTCTGCAGAGATGGTTGTCGGAGTCAGGCCTTCCGCCGCAGAAGATGACCATTCAGAGAGTGGACGTGGGAGAGAGGGGACTTGTTGCTTTGAAGAATATTCGGAAAGGGGAGAAGCTTCTCTTTGTGCCTCCATCGCTTGTCATAACTGCTGATTCTGAGTGGACCTGTGCAGAAGCGGGTGAAGTATTGAAAAAGAATTCAGTGCCAGATTGGCCATTGCTTGCAACTTACCTCATAAGTGAAGCCAGCTTGATGAAATCTTCAAGATGGAGCAATTATATATCAGCCCTACCTCGGCAACCTTATTCGCTTCTTTACTGGTCACGAGCAGAATTAGATCGCTACTTGGAAGCTTCACAGATTAGGGAGAGAGCAATTGAACGGATTAATAATGTTATTGGAACATACAATGATTTGAGGCTCAGAATATTTTCCAAATACCCCGATTTGTTCCCTGAAGAGTTGTTCAACATAGAGTCCTTCAAATGGTCATTTGGCATTCTTTTCTCACGCTTGGTTCGATTACCCTCAATGGATGGAAAGGTTGCCTTGGTTCCTTGGGCAGATATGCTGAATCATAGTTGTGATGTGGATACGTTTTTGGATTATGATGAGTTAACAAAGGGAATTGTCTTCACTACAGATCGGCCATATCAACCAGGTGAGCAGGTGTTTATTTCATATGGAAAAAAATCGAATGGGGAGCTTCTGTTGTCTTACGGGTTTGTTCCAAGGGAAGGCGCAAATCCGCGTGATTCAGTTGAGTTGTCACTGTCTCTAAAGAAATCTGATAGATCCTTCAAAGAGAAGTCAGAACTCTTGAAGAAGTATGGATTATCAGCATCTCAATGTTTTCCTATACAGATCACTGGTTGGCCACTGGAGTTAATGGCTTATGCTTATTTAGCTGTTAGTCCTTCAAGCATGAGAGGGCAGTTTGAAGAGATGGCTGCTGCAGCATCCAATAAAGTTACAACTAAGAAGGATTTGAGATATCCTGAAATAGAGGAGCAAGCATTGCAATTCATACTAGATAGTTGTGAATCCAGTATAACAAAATACAACAATTTCTTACAGGCTAGTGGATCTCTGGATTTGGATGTGACTTCTCCAAAACAACTCAACAGAAGACTCTTTCTGAAACAACTAGCGGTGGACTTGTGTACGAGCGAGCGGAGGATATTATTTCGCGCTCAATATATATTGCGAAGAAGACTGAGGGATATGAGGGCTGGTGAATTAAGAGCTCTAAAAATCTTTGATGGGTTCCGAAATCTTTTCGGTTGA 1524 0.4416 MAEASVIMYSTTFLAGFTSPIHRTHLGLSQPHPTPPLLSRKPHILQCSAPSASGGATQISAVEAIPWGCEVDSLENASALQRWLSESGLPPQKMTIQRVDVGERGLVALKNIRKGEKLLFVPPSLVITADSEWTCAEAGEVLKKNSVPDWPLLATYLISEASLMKSSRWSNYISALPRQPYSLLYWSRAELDRYLEASQIRERAIERINNVIGTYNDLRLRIFSKYPDLFPEELFNIESFKWSFGILFSRLVRLPSMDGKVALVPWADMLNHSCDVDTFLDYDELTKGIVFTTDRPYQPGEQVFISYGKKSNGELLLSYGFVPREGANPRDSVELSLSLKKSDRSFKEKSELLKKYGLSASQCFPIQITGWPLELMAYAYLAVSPSSMRGQFEEMAAAASNKVTTKKDLRYPEIEEQALQFILDSCESSITKYNNFLQASGSLDLDVTSPKQLNRRLFLKQLAVDLCTSERRILFRAQYILRRRLRDMRAGELRALKIFDGFRNLFG* 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g1716 507 CDD SET_RBCMT 87 322 IPR044431 GO:0016279|GO:0018022
Aev03g1716 507 Pfam SET domain 104 308 IPR001214 GO:0005515
Aev03g1716 507 ProSiteProfiles SET domain profile. 92 308 IPR001214 GO:0005515
Aev03g1716 507 SUPERFAMILY RuBisCo LSMT C-terminal, substrate-binding domain 338 502 IPR036464 -
Aev03g1716 507 PIRSF RMT_SET 1 504 IPR011192 GO:0009507|GO:0030785
Aev03g1716 507 Gene3D set domain protein methyltransferase, domain 1 59 321 - -
Aev03g1716 507 PANTHER - 62 302 - -
Aev03g1716 507 SMART set_7 92 314 IPR001214 GO:0005515
Aev03g1716 507 Gene3D - 327 496 IPR036464 -
Aev03g1716 507 Pfam Rubisco LSMT substrate-binding 341 474 IPR015353 -
Aev03g1716 507 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 62 302 - -
Aev03g1716 507 SUPERFAMILY SET domain 76 324 IPR046341 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g1716 79 272 NAC Transcription Factor Family AT3G56570 23.116 1.06e-06 49.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Aev03g1716 SET 1.6e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g1716 - - gmx:100803319 840.491