Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g1673 ATGGTTACTTTTGGTAGTTATTTTACTTATAAAAGAACAGAGAACCGTGTGCTTATGGTTTCAATCCTCCAACTTCGTAGCATATATGCTTCCTTGAGATGCTTTCATTCTGGTTCAAAATGGGGTTCCAGTGTTTCAGATAAAAATCAGAAATTTGTACCAAATGGGAATCCTAGTAGGGTAGGGCTTTTCTGGGACTTAGATAACAAGCCACCAAACTCAATTCCACCTTATGAAGTTGCCAATAAGCTTAGAATAGCTGCATCTTCATTTGGGGTTGTTAGGTATATGGTCGCTTATGCAAATAGCCACACTTTCAGCCATGTACCCCGAGGCATCAGGGAGAGGAGAAAAGAGAGGGATCTGATGAATCGTTTAGAGAACAAGGGTATTATCAAGCCGAATGAACCTTATCTTTGTAGGGTATGTGGGAGAAAGTTTTACACCAATGAGAAGCTTGTTAACCATTTCAAGCAGCTACATGAGCGCGAGCATATGAAGAGGGTAGTCCAGATACAGTCGGCGAGGGGGAGCAGGAGGCTGAAGTTGGTTTCGAAGTATTCAATGAAGATGGAGAAATACAAGAAGGCTGCAGGAGATACTCTGACTCCCAAAGTGGGGTATGGTTTGGCGGATGAGCTTAAACGAGCGGGGTTTTGGGTTCAGACCGTGTTGGATAAGCCGCAGGCTGCTGATCACGCGTTGGAAAGTCACATTGTGGATATGATGGATCATAAGAGGATTGAGTGTGTGGTACTTGTATCAGATGACTCTGATTTTGGTAATGTGATAAAGGAAGCAAAGCTACGGTGTCTCAAAACTGTTGTTATTGGGGATGCTAATGATGGAGTGTTGAAGAGGGTCGCCGATGCGGCATTTTCTTGGGAGGAAATCCTGATGGGGAAGGCTAAAAAGGAGGCTGTATCAGTTGTCGAGAACTGGAAGGATCGTGATATTTTGAAAAGGTTGGAGTGGACATATAATCCAGAGGTGGATAAGAAGAAATTTGATCTGGATGATATGGTTACTGACGAATCTGAAGATGAGAATATTGAAGATATTTGCGATGAAGTTGATGATGATTATAAGAATGACAGAGGTGCTTGGTGGGAACTAAAGTCCGATGAAGATGTCACAAATAAAAATTCAGGCAAATTGTCTATCTTGTCTACAACTAGGTGA 1182 0.423 MVTFGSYFTYKRTENRVLMVSILQLRSIYASLRCFHSGSKWGSSVSDKNQKFVPNGNPSRVGLFWDLDNKPPNSIPPYEVANKLRIAASSFGVVRYMVAYANSHTFSHVPRGIRERRKERDLMNRLENKGIIKPNEPYLCRVCGRKFYTNEKLVNHFKQLHEREHMKRVVQIQSARGSRRLKLVSKYSMKMEKYKKAAGDTLTPKVGYGLADELKRAGFWVQTVLDKPQAADHALESHIVDMMDHKRIECVVLVSDDSDFGNVIKEAKLRCLKTVVIGDANDGVLKRVADAAFSWEEILMGKAKKEAVSVVENWKDRDILKRLEWTYNPEVDKKKFDLDDMVTDESEDENIEDICDEVDDDYKNDRGAWWELKSDEDVTNKNSGKLSILSTTR* 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g1673 393 ProSitePatterns Zinc finger C2H2 type domain signature. 140 161 IPR013087 -
Aev03g1673 393 PANTHER - 46 379 - -
Aev03g1673 393 Gene3D - 55 299 - -
Aev03g1673 393 Pfam NYN domain 210 290 IPR021139 GO:0004540
Aev03g1673 393 CDD PIN_LabA-like 148 279 - -
Aev03g1673 393 ProSiteProfiles Zinc finger C2H2 type domain profile. 138 166 IPR013087 -
Aev03g1673 393 SUPERFAMILY beta-beta-alpha zinc fingers 135 164 IPR036236 -
Aev03g1673 393 PANTHER ZINC FINGER (C2H2 TYPE) FAMILY PROTEIN 46 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g1673 Aev-Chr3 18597125 18598306 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g1673 60 378 C2H2 Transcription Factor Family AT4G12240 60.182 5.57e-145 414
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Aev03g1673 NYN 2.6e-06 CL0280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g1673 - - lang:109328008 587.03