Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g1611 ATGATTTTCAACGAGGAAGTTGTGGAACCTTCCCAATCTCAAGCACAAAATATTGAGGATAAGGTGCTTAGGGTGATGGTTGAGGAGGACAAGTCTAAGGTATTCCATAAGATCATGACATTGAACATGGAAAAGGCTATTGATGACTCACCTTGTATAGCCTTTGAGGGACTTCTATTTGGCTCATGGAAACCTGTGAAGAACATAAAAATTGAGTCAAGAACTCTGTCCTTATATTTTAAGGATAACCATTGTTTGACAATGGAGAAAGGACCTTCTACTGACATTCGATTAAGATCAAGGAAAGCAACTTCATTAGATTGTTCTTGCTTTTTACGGCCTGGAATTGACATATGTGTTCTAATAGTGCCTAAATGTGGTAGTGATTCTGATAAATCTTCTTCTCAACCTGTGTGGGTTGATGCCAAAATCAAATCCATACAGAGAAACCCCCATGACTCAGAATGTTCATGTCAATATTATGTCAACTTATATGTGAATCAAGGTTCAATTGGCACACAAAGAACTCTTGTTAAGGAGGTTGAAATTGTTGGAATAAACCGAATTTCCATCCCACAAAGGCTTGATAATAATGCTCGTGAAAATAGTCCCTACCGATGGGTTTCAACTATGGATTGCTCCACAATACCTCAAACTAAGTTGCTCTGTGGGAAGTTCCTATCTGATATCTCATGGTTCATTGTTACATCTGTTTTAAAGAAGTTCTCATTCAACGTAAGATCTATTGACAACACAATTGTGTATCAAGTTTTGGCAGGTGATAAAGCTAATAATGGCTATACACTCAATCATTTCTCTTTCATAAATGTTGTGAACTTCAAAGTAGACCAAGATGACATAGTAAAATCATTTATTACTCAAGTTGATACATCTGGAATCAAGAAAATTGGCAATACAAATGATTTCATTTCCCCTGAAGGTGAAGCACCTCCATCTTGTAATATCCAAGGATTAAGGCGTTCCATGCGGCACCATGTAGAACCTGAGCGTTACCAAGGTTGTGATGCTTCCAATTTTAAGGATGTTTGTTCTATTAGAGCGTGGCCATACAAGGTAAGAGCAGGGAAAGATATTGTTGTTGATGATGATGATGAGTCAGTACCACTAGCATCAGAATGTGGCTTCCAAGCAGAGAAGTGTCTAAGGGAAGATGTTGTTAAAAACAATAGAAAAAGGTGGAATTCTAGTAAGGGAATTGTCATTCAACCAAGACTAGAATCAAAAAATCATACTCCACTTTCTACCATTAATCCTTGTAAAGGTGATCCCTTTCTGCATATGGATTGCTCTCTCAATAACAAGGGTGATGAAAACGAAATTGGGAATGTAGATGATGATGAAGAAGATGTTGGTGAATTTTCTTCAAGGGACTATCATATTTATGGCGCCTCTAGGAAGCGTAAGGAGAATTCATCTAGTGTAGATAATGTTGACATTGAATCTATATGGGAAGGGAGAAACCTCAAAAATGGAGTTGAAGGTAAAAGATATCAGTCAACACTTTCAAGAAGTAGAAATGAGGATGATAAAGAAAGGGCTTATAAAGACAGAACCATAAACTCAACTGCCTACAAGGAAATGATAGATTCATACTTGAAGAATAATAAAATACCAAACAAGGAAGAATTAAACATAAGGAATCAATGCAATGAAACAAGCAATTGTAAGCTGGAAAATGGAGAGGGAACATCTCCAAAGAAGGAAGATGCAGAAATGTCTGAAATAGATAAGTTGTGGAATGAGATGGACTCGTCATTGATATCAATTTATCTTCAAGAAGATGCTGTTCCTGCTGATATTGGAAAAATATGTGATCATGACAATAGATTGGATGAAGAGATTGGAATTTACTGTCTTAGATGCGGTGTTGTGAGTGTCGACATCACGAGTATCACCCCAGACTTTTTGCCACGCGTAAGAAGGCGCCATCAAGAGGAAGAGGAGCAAGAGGAGATGAAAGAGGAGGAGGAGACAAAGAAACTTGGCAAGGCTCAAGATCCTACCAATCAGGCTATATGTCAAGATTCTGCCATTGAACCTATATCTCAAGAAAATGCTAAAATTTGGGAATTGATTCCGGGGCTAAGAGAAAAGATGCATGTTCACCAGAGGAGAGCCTTTGAATTTCTTTGGCAAAACATAGTAGGGTCTACAAAACCATCACAAATGGAAGTAGAATCCAAAGATAGTGGTGGTTGTGTGATTTCTCATTGTCCAGGAGCAGGAAAAACTTTCCTCATCATCGCCTTTCTTACAAGCTTCTTGAAGCTTTTCCCGGGGAAAAGACCATTGGTGTTAGCTCCAAAAACTACATTATACACTTGGCATAAGGAGTTTATCAAATGGAAGATTCCTATTCCTGTGTATTTGATTCACGGTAGCGAATCACATAGAGAGTTGAAGAAGACATCATTATCCATTCCTGGTGTTCCAAAGCCAACAAATGATGTAAATCATACTTTGGATTGTTTAGAAAAGATACAAAAGTGGCGTGATCACCCCAGTGTTCTAATTATGGGATACACTTCATTTTTAGCAATGGTGAGAGGTAATTCAAAGTATGAACACAAGAAGTACATAGCAAAAGAGATGAGGGAAAGCCCTGGGTTGTTGATACTCGATGAAGGGCACAATCCAAGGAGTACCAAATCGAAGCTTAGGAAAGTTCTGATGACAGTAGAGACAGAGCATAGAGTGTTATTATCAGGTACATTATTTCAGAACAATTTTTGCGAGTACTTCAACACGTTGTGCTTGGCGAGGCCAAAGTTTATCCAAGAAGTGTTGAAAGAACTAGACATCAAGTACGAGAAGCACAAGGTAGCAGAGAAAGCACCACATTTGGTTGAGGCGCTTGCTCGGAAGTTCTTCTTAGACAAAATTGGAAAGATAATTAATTCAAAGGATGATGAATCTTTCGTTAGTGAAGAGAGTATACAAAGTATAAACTTGTTGAAAAAGCTTACAAGTGGTTTCATTGATGTTTATGAAGGTGGCAACCATGACACACTCCCAGGTTTGAAAGTTTATACTTTGCTGATAAACATGACTAAAGTACAACAGAGGATTCTGAATAAACTTCACAAGAAAATGGCAAATTATTCTTGTTACCCTTTGGAGATAGAACTTCTGATAACACTTGGATCAATACATCCATATCTGATAACAAAAGCAACATGCGCTTCTAAGTTCTTTTCTCATAAGCAATTAATGGAACTGGATAATTACAAGTATGATTTAAGGATAGGAACAAAAGTCAGATTTGTTATGAGCCTTGTCCACAGAGTTTTCAAGGAGGAGAAAGTTCTCATATTCTGCCATAACATTGCACCTATGATGATGCTATTGGAACAATTTGAGAAGTGTTTCAAGTGGAAAAAAGACAAAGAAGTTTTGGTAATAACTGGTGAACTTGAGCTTTTTGATAGAGGGAGAGTGATAGATAAGTTTGAAGACCCTTGTGGTGAATCAAAGGTGTTACTTGCTTCAATCACAGCTTGCGCAGAAGGGATTAGTCTCACTGCAGCATCAAGGGTTATTATGTTGGATACAGAGTGGAACCCATCAAAGACTAAGCAAGCTATTGCAAGGGCTTTTAGGCCTGGTCAACAGAAGATAGTTTATGTGTATCAGTTAATTGCTACAGAGTCTATTGAGGAAGATAAGAACAAGTCAAACACTTGGAAAGAGTGGGTTTCTAACATGATTTTCAACGAGGAGGTTGTGGAACCTTCCCAATCTCAAGCACAAAATATTGAGGATGAGGTGCTTAGGGTGATGGTTGAGGAGGACAAGTCTAAGGTATTCCATAAGATCATGACAATGAACATGGAAAAGCCTACTGATGACTCACCTTGA 3879 0.3803 MIFNEEVVEPSQSQAQNIEDKVLRVMVEEDKSKVFHKIMTLNMEKAIDDSPCIAFEGLLFGSWKPVKNIKIESRTLSLYFKDNHCLTMEKGPSTDIRLRSRKATSLDCSCFLRPGIDICVLIVPKCGSDSDKSSSQPVWVDAKIKSIQRNPHDSECSCQYYVNLYVNQGSIGTQRTLVKEVEIVGINRISIPQRLDNNARENSPYRWVSTMDCSTIPQTKLLCGKFLSDISWFIVTSVLKKFSFNVRSIDNTIVYQVLAGDKANNGYTLNHFSFINVVNFKVDQDDIVKSFITQVDTSGIKKIGNTNDFISPEGEAPPSCNIQGLRRSMRHHVEPERYQGCDASNFKDVCSIRAWPYKVRAGKDIVVDDDDESVPLASECGFQAEKCLREDVVKNNRKRWNSSKGIVIQPRLESKNHTPLSTINPCKGDPFLHMDCSLNNKGDENEIGNVDDDEEDVGEFSSRDYHIYGASRKRKENSSSVDNVDIESIWEGRNLKNGVEGKRYQSTLSRSRNEDDKERAYKDRTINSTAYKEMIDSYLKNNKIPNKEELNIRNQCNETSNCKLENGEGTSPKKEDAEMSEIDKLWNEMDSSLISIYLQEDAVPADIGKICDHDNRLDEEIGIYCLRCGVVSVDITSITPDFLPRVRRRHQEEEEQEEMKEEEETKKLGKAQDPTNQAICQDSAIEPISQENAKIWELIPGLREKMHVHQRRAFEFLWQNIVGSTKPSQMEVESKDSGGCVISHCPGAGKTFLIIAFLTSFLKLFPGKRPLVLAPKTTLYTWHKEFIKWKIPIPVYLIHGSESHRELKKTSLSIPGVPKPTNDVNHTLDCLEKIQKWRDHPSVLIMGYTSFLAMVRGNSKYEHKKYIAKEMRESPGLLILDEGHNPRSTKSKLRKVLMTVETEHRVLLSGTLFQNNFCEYFNTLCLARPKFIQEVLKELDIKYEKHKVAEKAPHLVEALARKFFLDKIGKIINSKDDESFVSEESIQSINLLKKLTSGFIDVYEGGNHDTLPGLKVYTLLINMTKVQQRILNKLHKKMANYSCYPLEIELLITLGSIHPYLITKATCASKFFSHKQLMELDNYKYDLRIGTKVRFVMSLVHRVFKEEKVLIFCHNIAPMMMLLEQFEKCFKWKKDKEVLVITGELELFDRGRVIDKFEDPCGESKVLLASITACAEGISLTAASRVIMLDTEWNPSKTKQAIARAFRPGQQKIVYVYQLIATESIEEDKNKSNTWKEWVSNMIFNEEVVEPSQSQAQNIEDEVLRVMVEEDKSKVFHKIMTMNMEKPTDDSP* 1293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g1611 1292 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 731 930 IPR014001 -
Aev03g1611 1292 PANTHER SNF2 DOMAIN-CONTAINING PROTEIN CLASSY 2 1 40 - -
Aev03g1611 1292 CDD SF2_C_SNF 1084 1220 - -
Aev03g1611 1292 Gene3D - 1012 1290 IPR027417 -
Aev03g1611 1292 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 695 933 IPR027417 -
Aev03g1611 1292 Pfam Helicase conserved C-terminal domain 1093 1208 IPR001650 -
Aev03g1611 1292 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 1095 1260 IPR001650 -
Aev03g1611 1292 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1010 1253 IPR027417 -
Aev03g1611 1292 Coils Coil 643 672 - -
Aev03g1611 1292 PANTHER SNF2 DOMAIN-CONTAINING PROTEIN CLASSY 2-RELATED 55 1282 IPR044567 GO:0080188
Aev03g1611 1292 MobiDBLite consensus disorder prediction 648 673 - -
Aev03g1611 1292 PANTHER SNF2 DOMAIN-CONTAINING PROTEIN CLASSY 2-RELATED 1 40 IPR044567 GO:0080188
Aev03g1611 1292 SMART ultradead3 702 942 IPR014001 -
Aev03g1611 1292 Gene3D - 674 964 IPR038718 -
Aev03g1611 1292 MobiDBLite consensus disorder prediction 648 670 - -
Aev03g1611 1292 Pfam SNF2-related domain 706 1037 IPR000330 GO:0005524|GO:0140658
Aev03g1611 1292 SMART helicmild6 1124 1209 IPR001650 -
Aev03g1611 1292 PANTHER SNF2 DOMAIN-CONTAINING PROTEIN CLASSY 2 55 1282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g1611 Aev-Chr3 17717625 17725832 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g1611 1119 1263 RAD5 or RAD16-like Gene Family AT5G05130 34.932 1.56e-12 70.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Aev03g1611 SNF2_N 3.2e-18 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g1611 K10875 - gmx:100811703 1278.85