Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aev03g1586 | ATGAAAGTAATGAGCTTTTCTGGTGGCATTACAAAACCCAGGTTTTTGTTTGCTCAAACAGAAATGCCTATTCTAGCATTTGGTCATTCTAAGTTGAGTGCTACATTGGCTCTTCGGTTTCCATGTAATTGTGTGAGGCGGATGGGGTTGGTTACAAAGCTTCAATATTCTGTTGCTGATAGGAGATTGGCTTCTAGTTCTTTGGACTCGCCAGAATCCAAACCTGAGCCCATTCCAGTGAGTAGGAGGCGTGGAGGAGGCTCATCGTTATATAGTCGCCCTAGTTTATCAGTAATGAAGAAGGACAGGGTGGAGATGCGTGAAAAGGTTTATGAATTTTTGCGGGGAATTGGCATTGTTCCCGACGAGCTTGATGGTCTTGAACTTCCTGTGACAGTCGAGGTTATGAGGGAACGTGTAGATTTTCTTCATAGTTTGGGGCTTACAATTGAAGACATTAACAACTATCCACTTGTTCTTGGCTGCAGTGTCAAGAAGAATATGATTCCTGTGCTTGACTACCTTGGTAAATTGGGAGTTAGGAAATCTACGTTCACTCAGTTTTTGCGGAGATATCCGCAGGTGCTCCATGCTAGTGTGGCTGTGGATCTTGTACCGGTGGTCAAGTATCTCCAGGGGATGGATATAAAGACCAATGATATTCCTCGCGTTCTTGAGAGGTACCCTGAAGTGTTAGGATTCAAACTTGAGGGAACCATGAGCACATCGGTTGCGTATTTGGTTGGAATTGGTGTATCAAGAAGAGAAGTTGGAGGTGTCTTAACAAGATACCCAGAGATTTTGGGGATGCGAGTCGGTAGAATCATCAAGCCTTATGTGGAATTTCTGGAAAGCTTGGGAATTCCAAAGTTAGCTATTGCTAGATTGATAGAGAAAAAACCTTATATTCTTGGATTTGGGTTGCATGAGAAGGTGAAGCCAAATGTGGAATCCCTTGAAGAGTTCAATGTTAGGAGAACATCACTTCCCTCTGTAATCGCTCAGTATCCTGACATCATTGGATCTGACTTACGGCCAAAGCTTGTAAATCAGAGAAATTTACTCAACTCTGTACTTGATATTGATCCTGAGGATTTTTGGCAGAGTTGTCGAGAAGATGCCGCAGGTAGTTAG | 1134 | 0.4312 | MKVMSFSGGITKPRFLFAQTEMPILAFGHSKLSATLALRFPCNCVRRMGLVTKLQYSVADRRLASSSLDSPESKPEPIPVSRRRGGGSSLYSRPSLSVMKKDRVEMREKVYEFLRGIGIVPDELDGLELPVTVEVMRERVDFLHSLGLTIEDINNYPLVLGCSVKKNMIPVLDYLGKLGVRKSTFTQFLRRYPQVLHASVAVDLVPVVKYLQGMDIKTNDIPRVLERYPEVLGFKLEGTMSTSVAYLVGIGVSRREVGGVLTRYPEILGMRVGRIIKPYVEFLESLGIPKLAIARLIEKKPYILGFGLHEKVKPNVESLEEFNVRRTSLPSVIAQYPDIIGSDLRPKLVNQRNLLNSVLDIDPEDFWQSCREDAAGS* | 378 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aev03g1586 | 377 | Pfam | mTERF | 172 | 371 | IPR003690 | GO:0003690|GO:0006355 | |
Aev03g1586 | 377 | Gene3D | Transcription termination factor 3, mitochondrial | 151 | 276 | IPR038538 | - | |
Aev03g1586 | 377 | Gene3D | Transcription termination factor 3, mitochondrial | 277 | 373 | IPR038538 | - | |
Aev03g1586 | 377 | PANTHER | CGI-12 PROTEIN-RELATED | 39 | 364 | IPR003690 | GO:0003690|GO:0006355 | |
Aev03g1586 | 377 | MobiDBLite | consensus disorder prediction | 65 | 93 | - | - | |
Aev03g1586 | 377 | SMART | mt_12 | 186 | 217 | IPR003690 | GO:0003690|GO:0006355 | |
Aev03g1586 | 377 | SMART | mt_12 | 294 | 325 | IPR003690 | GO:0003690|GO:0006355 | |
Aev03g1586 | 377 | SMART | mt_12 | 87 | 120 | IPR003690 | GO:0003690|GO:0006355 | |
Aev03g1586 | 377 | SMART | mt_12 | 330 | 362 | IPR003690 | GO:0003690|GO:0006355 | |
Aev03g1586 | 377 | SMART | mt_12 | 258 | 289 | IPR003690 | GO:0003690|GO:0006355 | |
Aev03g1586 | 377 | SMART | mt_12 | 222 | 253 | IPR003690 | GO:0003690|GO:0006355 | |
Aev03g1586 | 377 | SMART | mt_12 | 150 | 181 | IPR003690 | GO:0003690|GO:0006355 | |
Aev03g1586 | 377 | PANTHER | TRANSCRIPTION TERMINATION FACTOR MTERF4, CHLOROPLASTIC | 39 | 364 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aev03g1586 | Aev-Chr3 | 17369299 | 17370432 | Proximal |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | mTERF | Aev03g1586 | mTERF | 6.8e-57 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aev03g1586 | K15032 | - | gmx:100785223 | 563.918 |