Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g1586 ATGAAAGTAATGAGCTTTTCTGGTGGCATTACAAAACCCAGGTTTTTGTTTGCTCAAACAGAAATGCCTATTCTAGCATTTGGTCATTCTAAGTTGAGTGCTACATTGGCTCTTCGGTTTCCATGTAATTGTGTGAGGCGGATGGGGTTGGTTACAAAGCTTCAATATTCTGTTGCTGATAGGAGATTGGCTTCTAGTTCTTTGGACTCGCCAGAATCCAAACCTGAGCCCATTCCAGTGAGTAGGAGGCGTGGAGGAGGCTCATCGTTATATAGTCGCCCTAGTTTATCAGTAATGAAGAAGGACAGGGTGGAGATGCGTGAAAAGGTTTATGAATTTTTGCGGGGAATTGGCATTGTTCCCGACGAGCTTGATGGTCTTGAACTTCCTGTGACAGTCGAGGTTATGAGGGAACGTGTAGATTTTCTTCATAGTTTGGGGCTTACAATTGAAGACATTAACAACTATCCACTTGTTCTTGGCTGCAGTGTCAAGAAGAATATGATTCCTGTGCTTGACTACCTTGGTAAATTGGGAGTTAGGAAATCTACGTTCACTCAGTTTTTGCGGAGATATCCGCAGGTGCTCCATGCTAGTGTGGCTGTGGATCTTGTACCGGTGGTCAAGTATCTCCAGGGGATGGATATAAAGACCAATGATATTCCTCGCGTTCTTGAGAGGTACCCTGAAGTGTTAGGATTCAAACTTGAGGGAACCATGAGCACATCGGTTGCGTATTTGGTTGGAATTGGTGTATCAAGAAGAGAAGTTGGAGGTGTCTTAACAAGATACCCAGAGATTTTGGGGATGCGAGTCGGTAGAATCATCAAGCCTTATGTGGAATTTCTGGAAAGCTTGGGAATTCCAAAGTTAGCTATTGCTAGATTGATAGAGAAAAAACCTTATATTCTTGGATTTGGGTTGCATGAGAAGGTGAAGCCAAATGTGGAATCCCTTGAAGAGTTCAATGTTAGGAGAACATCACTTCCCTCTGTAATCGCTCAGTATCCTGACATCATTGGATCTGACTTACGGCCAAAGCTTGTAAATCAGAGAAATTTACTCAACTCTGTACTTGATATTGATCCTGAGGATTTTTGGCAGAGTTGTCGAGAAGATGCCGCAGGTAGTTAG 1134 0.4312 MKVMSFSGGITKPRFLFAQTEMPILAFGHSKLSATLALRFPCNCVRRMGLVTKLQYSVADRRLASSSLDSPESKPEPIPVSRRRGGGSSLYSRPSLSVMKKDRVEMREKVYEFLRGIGIVPDELDGLELPVTVEVMRERVDFLHSLGLTIEDINNYPLVLGCSVKKNMIPVLDYLGKLGVRKSTFTQFLRRYPQVLHASVAVDLVPVVKYLQGMDIKTNDIPRVLERYPEVLGFKLEGTMSTSVAYLVGIGVSRREVGGVLTRYPEILGMRVGRIIKPYVEFLESLGIPKLAIARLIEKKPYILGFGLHEKVKPNVESLEEFNVRRTSLPSVIAQYPDIIGSDLRPKLVNQRNLLNSVLDIDPEDFWQSCREDAAGS* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g1586 377 Pfam mTERF 172 371 IPR003690 GO:0003690|GO:0006355
Aev03g1586 377 Gene3D Transcription termination factor 3, mitochondrial 151 276 IPR038538 -
Aev03g1586 377 Gene3D Transcription termination factor 3, mitochondrial 277 373 IPR038538 -
Aev03g1586 377 PANTHER CGI-12 PROTEIN-RELATED 39 364 IPR003690 GO:0003690|GO:0006355
Aev03g1586 377 MobiDBLite consensus disorder prediction 65 93 - -
Aev03g1586 377 SMART mt_12 186 217 IPR003690 GO:0003690|GO:0006355
Aev03g1586 377 SMART mt_12 294 325 IPR003690 GO:0003690|GO:0006355
Aev03g1586 377 SMART mt_12 87 120 IPR003690 GO:0003690|GO:0006355
Aev03g1586 377 SMART mt_12 330 362 IPR003690 GO:0003690|GO:0006355
Aev03g1586 377 SMART mt_12 258 289 IPR003690 GO:0003690|GO:0006355
Aev03g1586 377 SMART mt_12 222 253 IPR003690 GO:0003690|GO:0006355
Aev03g1586 377 SMART mt_12 150 181 IPR003690 GO:0003690|GO:0006355
Aev03g1586 377 PANTHER TRANSCRIPTION TERMINATION FACTOR MTERF4, CHLOROPLASTIC 39 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g1586 Aev-Chr3 17369299 17370432 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Aev03g1586 mTERF 6.8e-57 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g1586 K15032 - gmx:100785223 563.918