Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g1584 ATGAAAGTAATGAGCTTTTCTGGTGGCATTACAAAACCCAGGCGGATGGGTTTGGTTGCAAAGCTTCAATATTCTGTTGCTGATAGAAGATTGGCTTCTAGTTCTTTGGACTCTCCAGAATCCAAACCTGAGCCCATTCCAGTGAGTAGGAGGCGGGGAGGAGGCTCATCGTTATATAGTCGCCCTAGTTTATCAGTAATGAAGAAGGACAGGGTGGAGATGCGTGAAAAGGTTTATGAATTTTTGCGGGGAATTGGCATTGTTCCCGACGAGCTTGATGGTCTTGAACTTCCTGTGACAGTTGAGGTTATGAGGGAACGTGTAGATTTTCTTCATAGTTTGGGGCTTACAATTGAAGACATCAACAACTATCCACTTGTTCTTGGCTGCAGTGTCAAGAAGAATATGATTCCTGTGCTTGACTACCTTGGTAAATTGGGAGTTAGGAAATCTACGTTCACTCAGTTTTTGCAGAGATACCCGCAGGTGCTCCATGCTAGTGTGGCTGTGGATCTTGTACCGGTGGTCAAGTATCTCCAGGGGATGGATATAAAGACCAATGATATTCCTCGGGTTCTTGAGAGGTACCCTGAAGTGTTAGGATTCAAACTTGAGGGAACCATGAGCACATCGGTTGCGTATTTGGTTGGAATTGGTGTATCAAGAAGAGAAGTTGGAGGTGTCTTAACAAGATACCCAGAGATTTTGGGGATGCGAGTGAAGCCAAATGTGGAATCCCTTGAAGAGTTCAATGTTAGGAGAACATCACTTCCCTCTGTAATTGCTCAGTATCCTGACATCATTGGATCTGACTTACGGCCAAAGCTTGTAAATCAGAGAAATTTACTCAACTCTGTACTTGATATTGATCCTGAGGATTTTGGCAGAGTTGTCGAGAAGATGCTGCAGGTAGTTAGTCTCAGTAGTGAACCTATGCTGAAGCATTTTGATTTTCTTAAGTATTGTGGATTTTCCTTGGAGCAGATGAGGAAGATGATTGTTGGATGCCCTCAACTACTTGCTTTAAACATTGACATCATGAAACTTAGCTTTGATTACTTCCAAATGGAGATGAAGAGACCTATGGAAGACTTGGTTATTTTCCCAGCATTCTTCACATATGGTTTGGAGTCAACTGTAAAACCTAGGCATAAGGTAGTTGCTAAGAAAGGATTAAAGTGTTCTCTTGCATGGATGCTTAATTGCTCTGATGAGAAATTTGAGCAACGAATGGAGTATGACACCATTGACATGGAAGAGATGGAAATGGAACCATCATTTGACATGAATTCACTAATGCAACCTAGGAATGAAGAATCTGATTCGGATTACGAAGACAGTGGTGATTATGATGATGATTAG 1362 0.42 MKVMSFSGGITKPRRMGLVAKLQYSVADRRLASSSLDSPESKPEPIPVSRRRGGGSSLYSRPSLSVMKKDRVEMREKVYEFLRGIGIVPDELDGLELPVTVEVMRERVDFLHSLGLTIEDINNYPLVLGCSVKKNMIPVLDYLGKLGVRKSTFTQFLQRYPQVLHASVAVDLVPVVKYLQGMDIKTNDIPRVLERYPEVLGFKLEGTMSTSVAYLVGIGVSRREVGGVLTRYPEILGMRVKPNVESLEEFNVRRTSLPSVIAQYPDIIGSDLRPKLVNQRNLLNSVLDIDPEDFGRVVEKMLQVVSLSSEPMLKHFDFLKYCGFSLEQMRKMIVGCPQLLALNIDIMKLSFDYFQMEMKRPMEDLVIFPAFFTYGLESTVKPRHKVVAKKGLKCSLAWMLNCSDEKFEQRMEYDTIDMEEMEMEPSFDMNSLMQPRNEESDSDYEDSGDYDDD* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g1584 453 Pfam mTERF 240 408 IPR003690 GO:0003690|GO:0006355
Aev03g1584 453 Pfam mTERF 140 245 IPR003690 GO:0003690|GO:0006355
Aev03g1584 453 MobiDBLite consensus disorder prediction 31 61 - -
Aev03g1584 453 SMART mt_12 118 149 IPR003690 GO:0003690|GO:0006355
Aev03g1584 453 SMART mt_12 362 393 IPR003690 GO:0003690|GO:0006355
Aev03g1584 453 SMART mt_12 330 361 IPR003690 GO:0003690|GO:0006355
Aev03g1584 453 SMART mt_12 226 253 IPR003690 GO:0003690|GO:0006355
Aev03g1584 453 SMART mt_12 55 88 IPR003690 GO:0003690|GO:0006355
Aev03g1584 453 SMART mt_12 154 185 IPR003690 GO:0003690|GO:0006355
Aev03g1584 453 SMART mt_12 295 325 IPR003690 GO:0003690|GO:0006355
Aev03g1584 453 SMART mt_12 258 290 IPR003690 GO:0003690|GO:0006355
Aev03g1584 453 SMART mt_12 190 221 IPR003690 GO:0003690|GO:0006355
Aev03g1584 453 MobiDBLite consensus disorder prediction 427 453 - -
Aev03g1584 453 Gene3D Transcription termination factor 3, mitochondrial 201 417 IPR038538 -
Aev03g1584 453 PANTHER CGI-12 PROTEIN-RELATED 39 241 IPR003690 GO:0003690|GO:0006355
Aev03g1584 453 PANTHER CGI-12 PROTEIN-RELATED 239 441 IPR003690 GO:0003690|GO:0006355
Aev03g1584 453 PANTHER TRANSCRIPTION TERMINATION FACTOR MTERF4, CHLOROPLASTIC 39 241 - -
Aev03g1584 453 PANTHER TRANSCRIPTION TERMINATION FACTOR MTERF4, CHLOROPLASTIC 239 441 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g1584 Aev-Chr3 17348859 17350437 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Aev03g1584 mTERF 1.6e-53 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g1584 K15032 - gmx:100785223 659.833