Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g1581 ATGGGTGCCGTTAAGTTGTACGAGCAGCAGCCTCCATTGGTTGACGCCGTGCCGGTTCTGTCACTGAACTCGCTGCCGTTGGGGTTCCGTTTCCGTCCAACGGACGAGGAACTCATCGATTTCTACCTGCGTCAGAAGATCAACGGCAACGGCGATGACGTCTGGGTCATTCGCGAAATCGATATTTGCAAATGGGAGCCTTGGGATTTACCTGATTTGTCAGTGGTGCGGAACAAGGATCCAGAGTGGTTCTTCTTCTGTCCACTGGACCGGAAGTATCCGAATGGGCACCGTCTGAAACGAGCAACGACTCATGGGTATTGGAAGGCCACCGGCAAGGATCGGAAGATTAAGTCTGGCTCCACCTTGATTGGAATGAAGAAGACTCTCGTTTTCTACATTGGCCGTGCTCCAAAGGAAGAGGACCCATTGGGTTATGCATGA 444 0.5225 MGAVKLYEQQPPLVDAVPVLSLNSLPLGFRFRPTDEELIDFYLRQKINGNGDDVWVIREIDICKWEPWDLPDLSVVRNKDPEWFFFCPLDRKYPNGHRLKRATTHGYWKATGKDRKIKSGSTLIGMKKTLVFYIGRAPKEEDPLGYA* 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g1581 147 SUPERFAMILY NAC domain 20 140 IPR036093 GO:0003677|GO:0006355
Aev03g1581 147 ProSiteProfiles NAC domain profile. 25 147 IPR003441 GO:0003677|GO:0006355
Aev03g1581 147 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 20 139 - -
Aev03g1581 147 Gene3D NAC domain 34 143 IPR036093 GO:0003677|GO:0006355
Aev03g1581 147 PANTHER NAC DOMAIN-CONTAINING PROTEIN 91 20 139 - -
Aev03g1581 147 Pfam No apical meristem (NAM) protein 26 139 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g1581 Aev-Chr3 17333284 17334412 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g1581 17 139 NAC Transcription Factor Family AT5G24590 75.000 5.24e-64 200
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Aev03g1581 NAM 6.5e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g1581 - - aip:107609038 276.944