Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g1575 ATGCGAGCTTCATGGGCTGATTTAGCTGCGAATTCCGCAGCTGAGAATGCTGGTTCTGGTTCATCTGCCAACAATGCTGGGGCAGGTAACAGTTCAGCTCCGGGACGGCCAGTTTATGTGCCTCCACATCTGAGGAACCGCCCAACCTCGGCGGAATCGCAGGCTGCCCCACCTTATACTGGTGGTGGTGGTGGTGCCCCTTCTGGTTCGGGGGCTGGTGCTGTTAATGCTGGATCACGGTGGCCTGCACCCCGAAATGATTACCGTTCGGGGGTTGGTGGCAGCAGTGGTGGTGGTGGTCGTGCTGGTGGATGGGGGAACCGAAGTGGTGGTTGGGATCGTGGCAGGGACCGTGAGGTCAATCCCTTTGGAGATCAGGATGAAGCAGAACAGGCTTTTAGTGAACAGGAGAATACAGGGATAAATTTTGATGCATATGAGGATATTCCGGTGGAGACCAGTGGGGAGAATGTGCCCCCACCTGTGAATACATTTGCTGAGATTGACTTGGGTGAAGCACTGAATCAGAATATAAGAAGGTGCAAGTATGTGAAGCCGACACCTGTTCAGCGGCATGCCATACCGATTTCCCTTGGTGGAAGGGATTTGATGGCTTGTGCGCAGACTGGTTCTGGAAAGACAGCTGCTTTCTGTTTCCCTATCATCAGTGGAATTATGAGGGGCCAGCCAATGCAGAGGCCGCCTCGTGGGGTGCGAACAGTGTATCCACTTGCCCTTGTTCTATCACCAACTAGGGAGCTATCAATGCAAATACATGAAGAGGCTAGGAAGTTTTCATACCAAACCGGGGTTAGGGTGGTTGTTGCTTATGGTGGAGCTCCAATAAACCAGCAGCTACGGGATCTTGAGAGAGGAGTGGACATTCTTGTTGCTACTCCAGGAAGACTTGTAGATTTGCTGGAGAGAGCAAGAGTTTCACTGCAGATGATCAGATATCTGGCCCTTGATGAGGCAGATAGGATGCTGGATATGGGTTTTGAGCCACAAATACGGAAGATTGTGGAACAAATGGACATGCCTCCACCAGGTGTCAGACAGACTATGTTGTTCAGTGCTACATTTCCAAAAGAGATACAGAGACTGGCCTCTGATTTCCTTTCAAATTACATTTTTCTTGCTGTTGGAAGAGTTGGATCAAGTACAGATTTAATTGTTCAAAGAGTTGAGTATGTTCAGGAGTCTGACAAGAGAAGTCATCTCATGGACCTTCTTCATGCACAGAGGGCAAACGGTGTACAAGGAAAGCAAGCTTTGACTTTAGTTTTTGTGGAGACAAAGAAGGGAGCTGATGCGCTGGAGCATTGGTTGTGCATGAATGGTTTCCCTGCTACTACTATTCATGGTGACAGGACCCAACAGGAAAGAGAGTTGGCATTGAGGTCATTTAAAAGCGGCAACACCCCTATATTGGTTGCCACTGATGTGGCTGCTCGTGGTCTTGATATTCCTCATGTTGCCCATGTGGTAAACTTTGACCTTCCAAATGATATTGATGATTATGTGCACCGTATTGGAAGGACAGGGCGAGCTGGGAAGAAAGGCCTTGCTACTGCATTCTTTAATGACAACAATGCATCTCTTGCAAGGGCTTTAGCAGAACTGATGCAAGAAGCAAATCAAGAAGTGCCTGCTTGGTTGTCACGGTATGCTGCTCGATCTTCATTTGGTGGAGGTAGGAACCGTCGTTCAGGAGGAGGCCGTTTTGGTGGCCGTGACTTCCGAAGAGAAGGTTCTTTCAATAGGGGTGGTTCTGATTACTACACTGGAAACAGCAGTGGTGGATATGGTGCATCTGGTGGATATGGTGGAGGAGGGGGAGGATACGGTCCCGGGGTAACCAGCGCATGGGACTAG 1875 0.4949 MRASWADLAANSAAENAGSGSSANNAGAGNSSAPGRPVYVPPHLRNRPTSAESQAAPPYTGGGGGAPSGSGAGAVNAGSRWPAPRNDYRSGVGGSSGGGGRAGGWGNRSGGWDRGRDREVNPFGDQDEAEQAFSEQENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGEALNQNIRRCKYVKPTPVQRHAIPISLGGRDLMACAQTGSGKTAAFCFPIISGIMRGQPMQRPPRGVRTVYPLALVLSPTRELSMQIHEEARKFSYQTGVRVVVAYGGAPINQQLRDLERGVDILVATPGRLVDLLERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPPGVRQTMLFSATFPKEIQRLASDFLSNYIFLAVGRVGSSTDLIVQRVEYVQESDKRSHLMDLLHAQRANGVQGKQALTLVFVETKKGADALEHWLCMNGFPATTIHGDRTQQERELALRSFKSGNTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKKGLATAFFNDNNASLARALAELMQEANQEVPAWLSRYAARSSFGGGRNRRSGGGRFGGRDFRREGSFNRGGSDYYTGNSSGGYGASGGYGGGGGGYGPGVTSAWD* 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g1575 624 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 390 557 IPR001650 -
Aev03g1575 624 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE-LIKE PROTEIN 66 594 - -
Aev03g1575 624 Gene3D - 382 561 IPR027417 -
Aev03g1575 624 MobiDBLite consensus disorder prediction 572 586 - -
Aev03g1575 624 MobiDBLite consensus disorder prediction 14 31 - -
Aev03g1575 624 SMART ultradead3 182 394 IPR014001 -
Aev03g1575 624 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 244 536 IPR027417 -
Aev03g1575 624 CDD SF2_C_DEAD 391 527 - -
Aev03g1575 624 Pfam DEAD/DEAH box helicase 187 368 IPR011545 GO:0003676|GO:0005524
Aev03g1575 624 MobiDBLite consensus disorder prediction 605 624 - -
Aev03g1575 624 Gene3D - 119 381 IPR027417 -
Aev03g1575 624 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 66 594 - -
Aev03g1575 624 MobiDBLite consensus disorder prediction 111 125 - -
Aev03g1575 624 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 194 379 IPR014001 -
Aev03g1575 624 Pfam Helicase conserved C-terminal domain 403 518 IPR001650 -
Aev03g1575 624 MobiDBLite consensus disorder prediction 562 588 - -
Aev03g1575 624 CDD DEADc_DDX3_DDX4 164 385 IPR044763 GO:0003724|GO:0005524
Aev03g1575 624 SMART helicmild6 437 518 IPR001650 -
Aev03g1575 624 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 163 191 IPR014014 GO:0003724
Aev03g1575 624 MobiDBLite consensus disorder prediction 1 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g1575 Aev-Chr3 17264140 17270550 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g1575 161 550 Eukaryotic Initiation Factors Gene Family AT3G19760 31.969 3.06e-62 210
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g1575 K11594 - gmx:100795756 957.977