Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g1563 ATGGGAGAAATTCAAGAGCCAATGTTGGTAAATTGGGACAAGGAAGAAGAGGAATTGGAGGAAAATGAAGCGGAGGCTCAAGTTGAAATATGGAAGTACATATTTGGGTTTGTGGAACTTGCAGTGGTGAAATGTGCTGTTGAGCTAGGCATAGCCGATGCAATTGATAGTCATGGCAAACCCATGACACTATCCGAAATTTCATCATCATTAGGGTGTGACCCTTCCTTTCTTAACCGAGTCATGAGGTTCTTGATTCACAGGAAGATATTCAAAGCCATCAACTCTAATAATAATTGCACACTTATTGCCTATGCTAACACTCCTCTTTCTCGTCGATTGATGAGAAATGGAAAACAAAGCATGGCTGGGCTGCTCCTTCTAGAGAGCAGCCCAGTGATGCTAGCTCCTTGGCACAGTTTAAGTGCTCGCGTTCTCGCCAATGGCAACTTCCCATTTGGGAAGGCTCACGGTGAGGACGTGTGGCACTATGCTGCGGCGAATAAGGGCCATAGCGACCTTATCAACGAGGCCATGGCATGTGATGCTAGGCTGGTTGTGCCTGCCATTGTTGAAGGTTGCGGCGAGGTGTTTGATGGTGTCAAAAGCATGGTGGATGTTGGTGGGGGAAATGGGACGACCTTGAAAATTGTTGTACAAGCGTGTCCTTGGATTCGAGGAATCAATTTTGATCTTCCTCATGTCATCTCTGTGGCCGCGGAGTGTCAAGGGGTGGATCATGTGGCTGGTGACATGTTTGTAAGAGTTCCCAAAGCTGATGTTGTGTTTATTAAGTGGGTCTTGCATGATTGGGGGGATGAAGAGTGCATCCAGATCTTGAAGAATTGTAGGGAGGCCATTCCAAAGGAAAACGGAAGGGTTATTATCGTTGAGGCTGTGATTGAAGAAGAAGGAGAGATTAAGCAAGGTAGTTTAAAGGACGTAGGGTTGATGCTGGATATGGTGATGATGGCTCACACTAATTTGGGCAAAGAGCGAACTCTGAAAGAGTGGGATTATGTTATCAAAATGGCAGGCTTCACTTCGTACACTGTCAAGCCCATTCCTGCTGTGCAGTCTGTGATCATAGCATTTCCATGA 1101 0.4605 MGEIQEPMLVNWDKEEEELEENEAEAQVEIWKYIFGFVELAVVKCAVELGIADAIDSHGKPMTLSEISSSLGCDPSFLNRVMRFLIHRKIFKAINSNNNCTLIAYANTPLSRRLMRNGKQSMAGLLLLESSPVMLAPWHSLSARVLANGNFPFGKAHGEDVWHYAAANKGHSDLINEAMACDARLVVPAIVEGCGEVFDGVKSMVDVGGGNGTTLKIVVQACPWIRGINFDLPHVISVAAECQGVDHVAGDMFVRVPKADVVFIKWVLHDWGDEECIQILKNCREAIPKENGRVIIVEAVIEEEGEIKQGSLKDVGLMLDMVMMAHTNLGKERTLKEWDYVIKMAGFTSYTVKPIPAVQSVIIAFP* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g1563 366 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 119 363 IPR029063 -
Aev03g1563 366 Coils Coil 9 29 - -
Aev03g1563 366 Gene3D Vaccinia Virus protein VP39 116 366 IPR029063 -
Aev03g1563 366 Gene3D - 12 114 IPR036388 -
Aev03g1563 366 SUPERFAMILY "Winged helix" DNA-binding domain 19 118 IPR036390 -
Aev03g1563 366 Pfam O-methyltransferase domain 138 347 IPR001077 GO:0008171
Aev03g1563 366 PIRSF O-mtase 9 366 IPR016461 GO:0008168
Aev03g1563 366 PANTHER O-METHYLTRANSFERASE 19 365 IPR016461 GO:0008168
Aev03g1563 366 Pfam Dimerisation domain 42 85 IPR012967 GO:0046983
Aev03g1563 366 PANTHER 3'-HYDROXY-N-METHYL-(S)-COCLAURINE 4'-O-METHYLTRANSFERASE 2-LIKE 19 365 - -
Aev03g1563 366 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 31 366 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g1563 Aev-Chr3 17122596 17125807 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g1563 43 352 Monolignol Biosynthesis Gene Families AT5G54160 37.421 1.84e-65 210
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g1563 K22588 - gmx:100782951 499.204