Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g1452 ATGGGTGAAACCGGTATCATTGTCCGGTTCCCTGGAAACTTAGACCCCAGAGCACAGGAGTTCAGACCCACACACCCAACCCAAACTCCGCTCCTGCAACCGGCAACCGTCTTTTCCCTTCCCCACCCTTACGCACAACCTCCATGCCCTTACCCCTATCCTTACCTGCCCACCCCTGGGGTACTGCCCTTCCATGACGCCGCCGCCGCCGCTTCCGCCGTCACAGTTCCCTACGCTCACTTCTCCTCTCCTGCTCCCTCCGCCACCTACTCCAACCCTCCGCCGCCGCCGCCACCACCTCCACCTCGTCTGTCCATCTCACCGACTCGGTCGTTACTCCTGACTCACCTTCCCTATGACCTGAGCCACGTCAGCGAATCCTCCATAAGGCGCGATTTGGAAGTTTTCGGCGACGTAAGAGGCGTCCAAATGGAATCCCTCCGTAACGGAATCGTGACCGTTCATTTTTACGACCTCAGGGACGCCGAAACGGCGCTGGCGGCGATTCGCCGTCAGCACATGCAGCAACAAACAAGGCTCCGCAACTACTACACCTCTGTTTTCGTTTCGAGACACGCCGGAGCTCCGCCGCATGTTCCGCCGCCGGCTCACGGCCTTGTCGGCGGTAGAGCCGTTTGGGCGCAGTATGTCATCCCGTCGTGCAACGCTGTCCCCGACGGCCAGAACCAAGGCACCATCGTCATCTTCAACTTGGACTCGGCGGTTTCCGCCGATAATCTCCGACGCGTTTTCGAGGCTTTCGGTCCTGTGAAGGAATTGAGAGATACGCCATCGAAAAAGTACCAAAGATTTGTGGAATTCTACGACGTTAGAGACGCAGCGAAGGCGTTGAAGCAGATGAACGGAAAGAAGATTCATGACAAAGAGGTTTTTATTGAGTTCAGTAGACCCGGTGGTGGTCACAGCAGAAGGTTTTTTCATTCTTCAGCACCTTCTAACAAAAAACCTTTCAACTTGAACGTTCCAAATTCTCTACAACCGAATTCGCAATTTTACCCTTCCCCGCGCAAATACTCGCGTCGTTTTGGTTCCGATGCTGCTGCGACCTCTTTCTCAAATTCTTCTTCTTCTCACCCGCAATTGGCCTTAAGGAATAAGGGAAGCCCGAGGGAGGGCTCGGATGTTGGGCCCGTTGAGGCCGCAATGGGCTCAATGGGCCTGGGTGAGAGGGTTGAGGAGGAGCATTTTGACGGGCCTGAAAGGAGGAATTCGGTTAGAAGAGAAAACGGTGAATCTGGTGAGGGAAGCGTGAAGCATCAACAACAGATAATTAGAAGTAGGAACTGGAAGGGGAAACAAGCGAAGAAGCATGAAACAAAGTATCTGATTAGAGATGATGACATTGTTGAGTCCAGTTCCAGAGATCCTCGAACCACTGTGATGATCAAGAACATTCCCAACAAGTATAGTCAGAAGTTACTATTAAATATGCTGGACAACCATTGCATTCACTGTAACGAGCAGATTGGCGACAGCGATGACCAGCCATTATCTTCCTACGACTTCGTGTACCTTCCCATTGATTTCAACAACAAGTGCAATGTGGGTTATGGGTTTGTGAACATGACGTCTCCAGAAGCCACCCTGCGACTCTACAAGGCCTTCCATCTTCAACACTGGGAGGTTTTCAATTCCAGAAAAATTTGCGAAGTTACTTATGCGAGAGTTCAGGGTTTGGAAGCATTGAAAGAGCACTTCAAGAACTCAAAGTTCCCATGCGAAATGGAGCATTACCTGCCAGTGGTGTTTTCACCTCCACGAGATGGTAGGTCATATCTGACGGAACCACTTCCAATAGTTGGTAATGGCAGCACCTACAAGCAACATACAACCATAACCATACCAAACAGTATTAGTGATGAGATTGAGTGTCACAATGATATGGCAAGTGCTAATTCTTCATCTGCTTCTGAAGACGTGCTCAGCAGTGGCGGCGTCTGTGATAATAATGATGACACAATTGAAGTAGTGGGTGGAGGACTTGTTCTGACCCTTTCTGATCATACAAATTAG 2034 0.5074 MGETGIIVRFPGNLDPRAQEFRPTHPTQTPLLQPATVFSLPHPYAQPPCPYPYPYLPTPGVLPFHDAAAAASAVTVPYAHFSSPAPSATYSNPPPPPPPPPPRLSISPTRSLLLTHLPYDLSHVSESSIRRDLEVFGDVRGVQMESLRNGIVTVHFYDLRDAETALAAIRRQHMQQQTRLRNYYTSVFVSRHAGAPPHVPPPAHGLVGGRAVWAQYVIPSCNAVPDGQNQGTIVIFNLDSAVSADNLRRVFEAFGPVKELRDTPSKKYQRFVEFYDVRDAAKALKQMNGKKIHDKEVFIEFSRPGGGHSRRFFHSSAPSNKKPFNLNVPNSLQPNSQFYPSPRKYSRRFGSDAAATSFSNSSSSHPQLALRNKGSPREGSDVGPVEAAMGSMGLGERVEEEHFDGPERRNSVRRENGESGEGSVKHQQQIIRSRNWKGKQAKKHETKYLIRDDDIVESSSRDPRTTVMIKNIPNKYSQKLLLNMLDNHCIHCNEQIGDSDDQPLSSYDFVYLPIDFNNKCNVGYGFVNMTSPEATLRLYKAFHLQHWEVFNSRKICEVTYARVQGLEALKEHFKNSKFPCEMEHYLPVVFSPPRDGRSYLTEPLPIVGNGSTYKQHTTITIPNSISDEIECHNDMASANSSSASEDVLSSGGVCDNNDDTIEVVGGGLVLTLSDHTN* 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g1452 677 SMART rrm1_1 232 300 IPR000504 GO:0003723
Aev03g1452 677 SMART rrm1_1 111 181 IPR000504 GO:0003723
Aev03g1452 677 MobiDBLite consensus disorder prediction 352 370 - -
Aev03g1452 677 CDD RRM3_EAR1_like 464 565 IPR034458 -
Aev03g1452 677 Pfam RNA recognition motif 2 464 574 IPR007201 -
Aev03g1452 677 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 233 297 IPR000504 GO:0003723
Aev03g1452 677 Gene3D - 395 574 IPR012677 -
Aev03g1452 677 Coils Coil 159 179 - -
Aev03g1452 677 SUPERFAMILY RNA-binding domain, RBD 87 174 IPR035979 GO:0003676
Aev03g1452 677 PANTHER RNA BINDING PROTEIN 49 645 - -
Aev03g1452 677 SUPERFAMILY RNA-binding domain, RBD 231 542 IPR035979 GO:0003676
Aev03g1452 677 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 231 304 IPR000504 GO:0003723
Aev03g1452 677 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 110 187 IPR000504 GO:0003723
Aev03g1452 677 MobiDBLite consensus disorder prediction 84 106 - -
Aev03g1452 677 MobiDBLite consensus disorder prediction 309 437 - -
Aev03g1452 677 MobiDBLite consensus disorder prediction 395 421 - -
Aev03g1452 677 Gene3D - 220 303 IPR012677 -
Aev03g1452 677 MobiDBLite consensus disorder prediction 88 106 - -
Aev03g1452 677 PANTHER TERMINAL EAR1-LIKE 1 49 645 - -
Aev03g1452 677 MobiDBLite consensus disorder prediction 313 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g1452 Aev-Chr3 15281685 15286246 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g1452 220 340 Eukaryotic Initiation Factors Gene Family AT1G49760 28.000 9.48e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g1452 - - adu:107469016 790.801