Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g1430 ATGGCTTCATCATTTGATCTCATTGCAAATGTTAATGCTTCTAAGCTGAACTGGAATTTTAAAGTTTTGGTTGTGCGTCTATGGCGTGTTCCATCCCGCGATAACTCAGCTGAGAGTTACTCCATTGAAATGGTCTTAATCCTGACAAGTACTGTAATAGCCTTTGATGATAACACATTCCCAATGCGCTTTTTTAGAATGAAGAATATAGACACTTTAATCAATGATGATGGTGTGGATCAGAATATGCTTATAGGTAAAATGCAGATTCAGAGTAGTTATTATGCATCAAAGTTACATGTCAATCCTGAAGTTAAAGAAGTTATAGATTTCAGGAATAAGTTATTGAGTGGATCAACAGCTTCTTCTTCTAGGATAAGCATATTGTCTTCCCAGCCAAGTTTTTCAGTCAATGATGAGATTATTTCTGGTGTTGTTAGTATTGGTACTATAGAACAAGTTCTGAGTACTACGAAGGAATGCTCCTTTTGGGTTATAGCTACAATTGTTTCATTGGAAGTAGATAACACTTCATGGACTTATAAAGCCTGCAAGAGATGTCCAAAGAAAGTTGAACAAGTTGAACGTGTTGGTAAAAAGTTTTATTGCAAAATGTGTGACCGGTTTGAGTCTAATCCATATTTCAGGTTTCGATTACAAGTTATTATTACTGATGGTACTGGAAGCATGACTTTGGTTTTGTGGGATAGGGAATCAGTGCAACTCATAGGGAAAACAACAAATGAAATAAAGCAAGATGATTCATCTCAGGGTGATACCTATCCTGATCTTTTAAATGATCTTCTTGAGATGAGAAGTTCCAGACGAAGAAGAATACCAGAAACGGAAACTGAGAGTGACGCAGTGAGAGTGACGCGATCGTCGAAGAAGAAATCTTGCATGCTTAGGATTTCTATTCCAGACATAAAGGGTTATTGTATGGATTATGGTAGAGATTCATCAAGAGGTATTAAAAATGTCCTTCCATTGCATCTTTATGAGATGATTAAGCAAAACTATGAGTTACTCACTTCTGCTACTGAAATAGACAACTACATTCTAAGTAAGAGGAACATAGAAAAAGGCATCCCAAGCTTATCTGCGAAAAGGTTTTTGGCCAATGCAACTACTAAAGAAACATCATCAAGCACAATCCAATATGAACGCGTGCTGACTTATGATGAAGCTAATTCAAGTCAAATTACTTTTCCTCGGTCTTTTGCTGCTGAAATGCTCAAATATGGCAATCCTGGAGAGTGGACTCTTGAGGTGAAATGTGTTGGAGGAGTAGATTACAACAAATGCAAGATGTTAAATTCCAAACCAGCTCAAGTCAAACTTGGTAGTGGATGGAGGGAGTTTACTAAGAAGTTTGAGCTTAAGAAGGGTTCAATAATCAAATTTACACGTCTTGATGGACATCATAGGAGAATTAGAGTTGAATTTATCAAGAGAGGTTGA 1461 0.3682 MASSFDLIANVNASKLNWNFKVLVVRLWRVPSRDNSAESYSIEMVLILTSTVIAFDDNTFPMRFFRMKNIDTLINDDGVDQNMLIGKMQIQSSYYASKLHVNPEVKEVIDFRNKLLSGSTASSSRISILSSQPSFSVNDEIISGVVSIGTIEQVLSTTKECSFWVIATIVSLEVDNTSWTYKACKRCPKKVEQVERVGKKFYCKMCDRFESNPYFRFRLQVIITDGTGSMTLVLWDRESVQLIGKTTNEIKQDDSSQGDTYPDLLNDLLEMRSSRRRRIPETETESDAVRVTRSSKKKSCMLRISIPDIKGYCMDYGRDSSRGIKNVLPLHLYEMIKQNYELLTSATEIDNYILSKRNIEKGIPSLSAKRFLANATTKETSSSTIQYERVLTYDEANSSQITFPRSFAAEMLKYGNPGEWTLEVKCVGGVDYNKCKMLNSKPAQVKLGSGWREFTKKFELKKGSIIKFTRLDGHHRRIRVEFIKRG* 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g1430 486 SUPERFAMILY DNA-binding pseudobarrel domain 383 479 IPR015300 -
Aev03g1430 486 CDD RPA1_DBD_C 159 269 IPR013955 -
Aev03g1430 486 Gene3D - 367 485 IPR015300 -
Aev03g1430 486 Gene3D - 143 304 IPR012340 -
Aev03g1430 486 CDD B3_DNA 387 484 IPR003340 GO:0003677
Aev03g1430 486 SUPERFAMILY Nucleic acid-binding proteins 151 269 IPR012340 -
Aev03g1430 486 Pfam Replication factor-A C terminal domain 164 279 IPR013955 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g1430 Aev-Chr3 14753815 14765680 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g1430 155 259 Core DNA Replication Machinery Family AT5G08020 29.524 9.52e-08 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g1430 - - ahf:112710177 179.489