Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g1408 ATGGGTAGAGCTCCTTGCTGTGACAAGAATAATGGTGTCAAGAAAGGTCCATGGACACCAGAGGAAGATCTTAAGCTCATCAACTACATTCAAACACATGGACCAGGAAATTGGAGAACACTCCCCAAGAATGCTGGTCTTCAAAGATGTGGAAAGAGTTGCCGCCTACGATGGACGAATTACCTGAGACCTGATATCAAGAGAGGAAGATTCTCCTTTGAAGAAGAAGAGACTATTATTCAGTTGCATAGTATCATGGGAAACAAATGGTCTGCTATAGCAGCAAAGCTTCCAGGAAGAACCGACAACGAAATAAAGAATTACTGGAACACTCACATTCGGAAGAGATTGCTTCGAATGGGAATCGACCCTGTCACTCACGCCCCACGCCTTGACTTGCTCGACATCTCCTCAATTCTAAGGTCACTTTTAGGGAACCCTTCTTCTTCCCTTTTCAATCTTCAACCCTTCATTATGAACCCTGAATTGTTAAAGCTTGCAGCCACAGCTTCTCTTCTTTCCAATATCACTGACAATAATAGTATTTTACAACAAATCATTGCTGGGAATTGCCAAGTTGCCCCAAAACAAGAGTTTGGTGATCAGTTAAATAATACACCAGCAACAACTCAAGCTACAGGGGAAATGAATTCGACCCCTTTTGGTGAGATTGAGAACCTTATTTTGCAACAAAACCAAGATGGGTTGGTCCAATCATTAAACAGAGGAAACCAAGATTTGGGCTATGACTCTGTACTGTCGAGTCCCAACCCCATGGATTCATCATCCAATTATGTGAATAGCGGCACAGAGGAAGAGTGGAATAGTTATTGCAGTGAATTGTTCAAGTTTGAAATTCCTGAGTCTCTGGATATTAGTGATTTCTTGTAA 891 0.4186 MGRAPCCDKNNGVKKGPWTPEEDLKLINYIQTHGPGNWRTLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFSFEEEETIIQLHSIMGNKWSAIAAKLPGRTDNEIKNYWNTHIRKRLLRMGIDPVTHAPRLDLLDISSILRSLLGNPSSSLFNLQPFIMNPELLKLAATASLLSNITDNNSILQQIIAGNCQVAPKQEFGDQLNNTPATTQATGEMNSTPFGEIENLILQQNQDGLVQSLNRGNQDLGYDSVLSSPNPMDSSSNYVNSGTEEEWNSYCSELFKFEIPESLDISDFL* 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g1408 296 PANTHER TRANSCRIPTION FACTOR MYB41 1 291 - -
Aev03g1408 296 SMART sant 67 115 IPR001005 -
Aev03g1408 296 SMART sant 14 64 IPR001005 -
Aev03g1408 296 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 10 66 IPR017930 -
Aev03g1408 296 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 291 - -
Aev03g1408 296 ProSiteProfiles Myb-like domain profile. 10 62 IPR001005 -
Aev03g1408 296 SUPERFAMILY Homeodomain-like 12 109 IPR009057 -
Aev03g1408 296 CDD SANT 70 113 IPR001005 -
Aev03g1408 296 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Aev03g1408 296 Gene3D - 14 67 - -
Aev03g1408 296 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 67 117 IPR017930 -
Aev03g1408 296 CDD SANT 17 62 IPR001005 -
Aev03g1408 296 Pfam Myb-like DNA-binding domain 68 112 IPR001005 -
Aev03g1408 296 Pfam Myb-like DNA-binding domain 15 62 IPR001005 -
Aev03g1408 296 Gene3D - 70 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g1408 Aev-Chr3 14437494 14439290 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g1408 1 296 MYB Transcription Factor Family AT4G21440 50.420 4.43e-105 308
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Aev03g1408 Myb_DNA-binding 1.9e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g1408 K09422 - gmx:102668351 374.4