Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g1394 ATGGAACCAATTCTATTTGCAACTTCCATAAAGGAGAATATTCTTTTTGGCAAAGAAGGGGCTTCGATGGAAGCTATTATAAATGCTGCAAAATGTGCAAATGCACATGATTTCATTGTTAAACTTCCTAATGGATATGAAACTCAAGTAGGACAACTTGGGGCTCAACTATCTGGAGGACAAAAGCAAAGGATTGTCATTGCAAGGGCATTAATTAGAAACCCTAAAATCCTATTCCTTGATGAAGCCACAAGTGCATTGGATTCAAAATCTGAAAGAATAGTCCAAGATGCACTGGACTTTGCATCCAAAGGCAGAACAACAATCATCATTGCTCATCGCTTATCCACAATCCTCAATGCTGATTCAATACTAGTTCTTCAATCAGGAAGAGTCATTGAATCTGGTTCTCATGATGAATTACTCAAATTAAACAATGGTCAAGGTGGTACTTATAGCAAAATGCTACAACTACAACACAAAAGTCAAAATGAAAATACAAAAAAATTGCATCAAGTAAATTATGAGAGTCCTCAAAATATGCAAATTCCAAAATCTGGCATGCCAATTAGAACACTAACACCAACTCATCATGGATCAAGCACTCCACAATCATTTAGTCCCATATACTCAATAAGTGTTACAGGGTCCATATTTGACGATGACTATTATAGTAGTGAGAATAATTTTGGGAAATCTTCACAATCAAATTATTTCTCACAATGGCGATTACTAAGGATGAATGCACCTGAATGGAAGTATGTTGTGTTAGGGTGTATAGGTGCAATTGGATCTGGAATATGCCAACCATTTTATTCATATTGCTTGGGAATAGTTGCATCGGTTTACTTCATAACAGATCACAATCAAATCATCTCAGAAATCAAGTTCTACTCAACAATATTCTGCATCATTGCTATTGTCAATTTCACTTCAAGCCTTATTCAACACCATAATTTTTCCATCATGGGAGAACATTTGTTGAAAAGGGTAAGAGAGAATTTTCTAGAAAAGGTGTTGACTTTTGAGGTAGGATGGTTTGATCAAGAGGATAACACGAGCGCAGCGATTTGCGGACGGTTAGCTACAGATGCAAACTTGGTTAGGTCCCTTGTTGCAGAGAGGATGTCACTACTAGTCCAAGTTTTTGCCATGGCTACTTTAGCTTTCGTGCTTGGTTTGGTTGTCTCGTGGAGGGTCGCTATTGTAATGATCACGATGCAGCCTTTGATCATCACGTGTTTCTACTCAAAAAGTGTTCTTATGAAGAGCATGGCAGGGAAAGCTAGAAAGTCGCAGAGTGAAAGTAGCCAATTAGCAATGGAGGCTACAATAAATCACAGGACTATTGCTGCATTCTCATTAGAGAAAAAGATACTGAATTTGTTCCGAAAATCCATGGAAGGACCACACAAGGAAAGCATAAAGCAATCATGGATTTCAGGTTCAATACTGTCAATGTCACAGTTTATAACTACAGCATCTATAACTTTAACATTTTGGTATGGTGGATGGTTATTGAACAAGAATTTGGTATCATCAAAACACCTTTTGCAAGTTTTCCTTATCTTGATGGGAACTGGTAGACAAATTGCAGATGCAGGAAGCATGACTTCTGACATAGCGAAAAGTGGCAGAGCAATCGACTCGATTTTCGCGATATTGGACCGACATAGCCAAATTGAGCCCGAAGATCCTAGGCTTAGAAAATTCAATAAGAACAATATGAAGGGTCATATAAAATTCAAAGATGTGTTCTTCTCATACCCATCAAGGCCTAATCAAATGATTCTAAAGGGACTTAGTCTAAGCATTGAAGCTGGAAAAACAATAGCATTGGTGGGACAAAGTGGATCAGGGAAATCCACTATTATTGGACTAATTGAAAGATTTTATGACCCTATGAATGGATCAGTGTACATCGATGGTTATGATATTAGGGAATTTGATTTGAAGAGTTTGAGATCAAATATTGCATTGGTGAGTCAAGAGCCTACACTATTTGCAGGGACTATACGTGACAACATTGTTTATGGGAAGAATGATGCATTAGAAGATGAAATTAGAAGGGCTGCAAGTCTTGCAAATGCTCATGAGTTTATAAGCTCAATCAAAGAAGGGTATGACACATATTGTGGAGAAAGAGGAGTTCAACTCTCAGGAGGACAAAAGCAAAGGATTGCAATTGCAAGAGCAATACTAAAGAACCCATCAATCCTTCTCTTAGATGAGGCAACAAGTGCACTAGATAGCATGTCAGAGAATCTAGTGCAAGAAGCACTTGAGAAAATGATGGTAGGAAGAACGTGTGTTGTTATAGCTCACCGCTTGTCAACAATACAAAGTGTTGATACCATAGCTGTGATTGGGAATGGGAAAGTGGTGGAACAAGGATCACACTCTGAGTTATTGAGCATTGGATCAAAGGGTAGTTACTACTCTTTGATTAGTCTACAACATGGTCACTCTAATTGA 2475 0.3798 MEPILFATSIKENILFGKEGASMEAIINAAKCANAHDFIVKLPNGYETQVGQLGAQLSGGQKQRIVIARALIRNPKILFLDEATSALDSKSERIVQDALDFASKGRTTIIIAHRLSTILNADSILVLQSGRVIESGSHDELLKLNNGQGGTYSKMLQLQHKSQNENTKKLHQVNYESPQNMQIPKSGMPIRTLTPTHHGSSTPQSFSPIYSISVTGSIFDDDYYSSENNFGKSSQSNYFSQWRLLRMNAPEWKYVVLGCIGAIGSGICQPFYSYCLGIVASVYFITDHNQIISEIKFYSTIFCIIAIVNFTSSLIQHHNFSIMGEHLLKRVRENFLEKVLTFEVGWFDQEDNTSAAICGRLATDANLVRSLVAERMSLLVQVFAMATLAFVLGLVVSWRVAIVMITMQPLIITCFYSKSVLMKSMAGKARKSQSESSQLAMEATINHRTIAAFSLEKKILNLFRKSMEGPHKESIKQSWISGSILSMSQFITTASITLTFWYGGWLLNKNLVSSKHLLQVFLILMGTGRQIADAGSMTSDIAKSGRAIDSIFAILDRHSQIEPEDPRLRKFNKNNMKGHIKFKDVFFSYPSRPNQMILKGLSLSIEAGKTIALVGQSGSGKSTIIGLIERFYDPMNGSVYIDGYDIREFDLKSLRSNIALVSQEPTLFAGTIRDNIVYGKNDALEDEIRRAASLANAHEFISSIKEGYDTYCGERGVQLSGGQKQRIAIARAILKNPSILLLDEATSALDSMSENLVQEALEKMMVGRTCVVIAHRLSTIQSVDTIAVIGNGKVVEQGSHSELLSIGSKGSYYSLISLQHGHSN* 825
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g1394 824 Pfam ABC transporter 10 85 IPR003439 GO:0005524
Aev03g1394 824 ProSitePatterns ABC transporters family signature. 719 733 IPR017871 GO:0005524
Aev03g1394 824 CDD ABC_MTABC3_MDL1_MDL2 580 819 - -
Aev03g1394 824 SUPERFAMILY ABC transporter transmembrane region 243 557 IPR036640 GO:0005524|GO:0016021
Aev03g1394 824 ProSitePatterns ABC transporters family signature. 57 71 IPR017871 GO:0005524
Aev03g1394 824 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 580 816 IPR003439 GO:0005524
Aev03g1394 824 Gene3D - 570 824 IPR027417 -
Aev03g1394 824 Pfam ABC transporter 598 747 IPR003439 GO:0005524
Aev03g1394 824 CDD ABC_6TM_Pgp_ABCB1_D2_like 245 561 - -
Aev03g1394 824 Gene3D - 2 160 IPR027417 -
Aev03g1394 824 Gene3D ABC transporter type 1, transmembrane domain 226 566 IPR036640 GO:0005524|GO:0016021
Aev03g1394 824 Gene3D ABC transporter type 1, transmembrane domain 161 182 IPR036640 GO:0005524|GO:0016021
Aev03g1394 824 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 256 543 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aev03g1394 824 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 2 821 IPR039421 -
Aev03g1394 824 PANTHER OS04G0481700 PROTEIN 2 821 - -
Aev03g1394 824 Pfam ABC transporter transmembrane region 256 523 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aev03g1394 824 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 574 819 IPR027417 -
Aev03g1394 824 SMART AAA_5 10 131 IPR003593 -
Aev03g1394 824 SMART AAA_5 607 793 IPR003593 -
Aev03g1394 824 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 159 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g1394 Aev-Chr3 14321566 14327499 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g1394 254 821 Calmodulin-binding Proteins AT2G36910 37.871 4.74e-116 380
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g1394 K05658 - gmx:100804664 1251.5