Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g1278 ATGAGCACAGAACAGAAAGGAAGAGAATCAAATGAGCCAGAGAAAAATAATAACAAGAAGAGTGTAGTATTAGAACAAGAAACACAGAGAGAAACAAGAGAAGCAGAACAGATGAAGAAGATACATGGCTGTGAGGTTGAGGCCATTGGCATCAACTACAAGATCCACACTCACAATACAGAACACCCTTTTAAGATCTTCAACAAATCTCAACAACTTGACACAGATGAAGATGGTGAGAAAAGATGCAGTGGAGTGAGGCATGTTCTGAAGAATGTGTCTTGCAGAGCCAAGCCATGGGAAATCCTTGCAATTGTAGGGCCAAGTGGAGCTGGAAAATCATCACTGCTTGAGATTCTTGCAGGAAAAGTTAATCCACAAAAAGGGTCTGTTCTTGTAAACCACAAGCCTGTGGACAAAGCTCAGTTCAGGAAGCTTTCTGGTTATGTCACACAGAAGGATACTCTGTTTCCTTTACTTACAGTTGAAGAAACCATGATGTTCAGTGCAAAGCTGAGGCTAAAGCTTCCTCAGGAGCAGCTTCATTCAAGGGTCAAGTCACTGATTCACGAGCTCGGGCTGGACCATGTTGCTGGGACTAGAATTGGTGATGAGAGGGTCAGAGGCATATCTGGCGGCGAAAGGCGAAGAGTTTCTATCGGTGTTGAAGTCATACATGATCCAAGAGTGCTGATTCTTGATGAACCAACTTCTGGTCTTGACAGCACTTCTGCTTTGCAGATTATTGATATGCTTAAGGTTATGGCTGATACTAAGGGAAGAACTATAATCCTCAGTATCCATCAACCTGGGTTCAGAATAGTGAAGTTGTTCAATTCATTGCTGTTGTTAGCCAATGGTTCTGTGTTGCATCATGGCAGTGCAGATTTGTTGGGTGTGAATCTGAGGCTAATGGGTTTGGAGCTTCCCCTTCATGTCAATGTAGTTGAGTTTGCAATTGAGTCCATTGAAGCTATTCAGCAACAACAGAAAAGCAAGGAGGTTCTGCTAGAGACGCCGCCGAGGCGGTTGCAGGGGACAGTTCAGCAGAAGAAAGGTGATGATGAACAAGGTGAGTGTAGAAGTGGTAAGTTTACTCTACAACAGCTCTTTCAACAATCCAAGGTGATTGATGAAGAGATCATAAATTCTGGGATGGATTTCACTTGTGATTTTGCTAATTCTAGATTGAGAGAAACTATGATTCTCACTCATAGATTCTCCAAGAACATCTTTCGAACAAAAGAGCTGTTTGCATGTAGGACCATTCAGATGCTTGTTGCTGGGCTTGTTTTAGGTTCAATCTTTTGTAATCTCAAGGATGATCTAATTGGAGCAGAGGAAAGAGTTGGTCTATTTGCTTTCATATTAACATTACTGTTATCAAGCAGTATAGAAGCTCTACCAATTTTTCTGCAAGAAAGGGAGATTCTGATGAAGGAGACATCTTGTGGAAGCTACCGTGTATCATCCTACGCTATTGCCAATGGCCTAGTTTACTTGCCATTTCTTATGATCCTAGCAATTCTGTTCTCAATGCCCTTATACTGGCTTGTTGGTCTCAACAGAAATTTCATGGCATTTCTACACTTTTTGTTGCTGATATGGTTGATTCTCTATACTGCAAATTCAGTTGTGGTGTGTTTCAGTGCTCTGGTGCCTAATTTCATTGTTGGGAATTCAGTGATTGCTGGTGTCATAGGTTCATTCTTCTTGTTCTCGGGATATTTCATATCAAAGCATGAAATTCCAAGTTACTGGATTTTCATGCATTATATATCTCTATTCAAGTATCCCTTTTGA 1803 0.4121 MSTEQKGRESNEPEKNNNKKSVVLEQETQRETREAEQMKKIHGCEVEAIGINYKIHTHNTEHPFKIFNKSQQLDTDEDGEKRCSGVRHVLKNVSCRAKPWEILAIVGPSGAGKSSLLEILAGKVNPQKGSVLVNHKPVDKAQFRKLSGYVTQKDTLFPLLTVEETMMFSAKLRLKLPQEQLHSRVKSLIHELGLDHVAGTRIGDERVRGISGGERRRVSIGVEVIHDPRVLILDEPTSGLDSTSALQIIDMLKVMADTKGRTIILSIHQPGFRIVKLFNSLLLLANGSVLHHGSADLLGVNLRLMGLELPLHVNVVEFAIESIEAIQQQQKSKEVLLETPPRRLQGTVQQKKGDDEQGECRSGKFTLQQLFQQSKVIDEEIINSGMDFTCDFANSRLRETMILTHRFSKNIFRTKELFACRTIQMLVAGLVLGSIFCNLKDDLIGAEERVGLFAFILTLLLSSSIEALPIFLQEREILMKETSCGSYRVSSYAIANGLVYLPFLMILAILFSMPLYWLVGLNRNFMAFLHFLLLIWLILYTANSVVVCFSALVPNFIVGNSVIAGVIGSFFLFSGYFISKHEIPSYWIFMHYISLFKYPF* 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g1278 600 ProSitePatterns ABC transporters family signature. 210 224 IPR017871 GO:0005524
Aev03g1278 600 Gene3D - 71 309 IPR027417 -
Aev03g1278 600 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 87 296 IPR027417 -
Aev03g1278 600 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 73 311 IPR003439 GO:0005524
Aev03g1278 600 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 38 600 - -
Aev03g1278 600 CDD ABCG_EPDR 80 293 - -
Aev03g1278 600 MobiDBLite consensus disorder prediction 1 38 - -
Aev03g1278 600 SMART AAA_5 99 288 IPR003593 -
Aev03g1278 600 Pfam ABC-2 type transporter 400 600 IPR013525 GO:0016020|GO:0140359
Aev03g1278 600 PANTHER ABC TRANSPORTER G FAMILY MEMBER 5 38 600 - -
Aev03g1278 600 Pfam ABC transporter 90 238 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g1278 Aev-Chr3 12225198 12227000 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g1278 89 322 Calmodulin-binding Proteins AT2G36910 26.423 8.90e-13 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g1278 K05681 - gmx:100789722 927.932