Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g1265 ATGCATATAAGCTCAAAAATTAGTTTGGAGGAACTGCATGCTAAAATTCTCAGGAGATTAGGAAGCGAGGACAAATTCATCAATGAGATGATGTATCGCATGCCGCTGAATACTATTGATGGAGGTTTAATAAGGTACGGTTGTTGTGATATTAGTAATGATGAAGATGTTATTATGATGTTTGATTATCATCGTAAATTTCCGAATATACATCTTGTGGAATTGTATGTTGTTGTTGGAGATACAAATATTATTAGGCATATACCTAGTTCTGGTGGATCCGCACCTACCCCAATTCATGGCGTTGCTGTTGTTGCACGTGAGGAACCTATTGTTAGGTCTATGGGGCAACCACAAAATGATGAGAATATAGTCATTTGTCCGTCACAAGTTGTAGCGATGTTGGGCAATGTTAATGATTATGAATCTCCAATTCAAGCGTGCAATTACAATGAACAAGATTTTGATGATGATGATACTCATGAACCATTTGAAGTTCCATATGATGATGATGATGACATAGATGGGGTAGGTGTGACGCCTATTAGTCAAAATGTTACACAACCTCCAGCTCAATCACAAGTGGGAGAGGTTGCACACTACACTAATCTGAATTTGGCGGCAATGGGCGATTTCAATGCAGCTGGTTCATCTCGCCTCACTGTTCTTGGTGATATATCTGGTGAGAAAAATATATGTGTCGGTCAACAATTTCCAAACAAAGAATCTGTGCTTCTTGGATTAAAGAATTATAGCATTCGTAGAGGCGTTGAGTATAAAGTTTATGAATCTGATCCAAAGAAGTACCTTGTTAAGTGCAAGCTATTTGGGAGAGGGTGCGACCCTACCGTACTAGTTAGAGTGTTGCAGGATTCAATCCATGAGAAGTACGGATTTACTCCGTCCTACCGGAAAGCATGGCTTGCAAAGCAAAAGGCTATAGCTCGAATATATGGAGATTGGGAGGAGTCATACAATGAACTACCAAAGTGGCTTCTTGCTATGCAGCATTGTGCTCCAGGCACTGTTGTGGAGATACAGACTGCTCCCTATTACAATGGAAATTTGGTTGATCGTACTTGTGTTATGTTCAGTCGTGTGTTTTGGAGTTTTCCGGCATGTATTGAAGGGTTTAAGCAATGCAAGCGATTTGTCTCCATTGATGGTACACATTTATATGGAAAATATGGTGGTACATTATTGATGGCAATTGCACAGGATGGGAACTCAAATATACTTCCCATTGCTTTTGCTATTGTTGAGAAGGAGACAATAGATGCCTGGTCTTTCTTTCTGACCAATCTCCGTCGTCATGTAACTCCTCAAGAAGGCATTCTGATTATATCTGATAGACATGCTGCAATCAAGGCATCGATTGATGCTGAAGGTAGTGGGTGGAAAGAACCTCATGCATATCATGCCTATTGTATCCGACATATCGCTTCTAATTTTGCTCTTAGACTCAAGAACAAAGAGGCAAAGAGACATCTGGTAAATGCAGCATATGCGAAGACCGAGTCTGAATTTGAATACTATTATGGGCTTGCAACTGGGTTTAATCCGGAAGCGCATGCATGGATGGGAAGAATCCCTTTGAGGAAGTGGGCCCAACACGCAGATGAAGGGCGAAGGTATGGCCACATGACCACAAATCTTTCTGAGTGTGTTAATGCTGTTTTGAAAGGCGTTAGGAATCTCCCTATAACTGCAATTGTCAAAGCCACATATTTTCGTTTGGGAAGTCTATTTCGTAAAAAGGGGAAGACAGCCCAAGCACAAATCGCAGCTGGGGGGATATTTTCACAGTTCCTCTTGAACGAAATTCAGAAAAATCGTGAAGAGATGATGGGCAATATGTTTGTCTCTAGCTTTAGTAGGAGCGACCAGGCTTTCACAGTTCAGGTGCAAGGACCAGTTGGAACTTGGAGTCAGAGGACTTTTGCTGTTAGGTTAGGGGAGCGAAAATGTGACTGTGGTTATTTTCAAGCTCTGCACTTTCCTTGTCCTCATGTTCTTGCTGCTTGCTCATATCCAGAGGTTAGACTCGATTGGAGCTCTTATGTTGATGATGTTTACCGGATGGAAAATGTGATGAATGTATATGCCATGGAATTTCCTCCAATTGCAAATGAATCATCATGGCCTTCGTTCTCCGGACCACGTTTGAGACCCGACCCTGAGCTCAGGAGGGCTAAAGAAGGAAGACCACTTTCTACCAGGATTCGTAATGAGATGGATGAAGTGGAGACTGGTCGAGGGAAGCATTGTGGTCTTTGCCGTCAGCAACTGAATTCGCGATTCACAACAAGTTACTTTGCACAACTGCCAAATCAGGTAAAATTTAGGATACCTACTGGATCTGAATGGCTTATGAAGGTTGAAGAAAGGGAGAACGAGGTTTGGTTGACAGATGGATGGACTGATTTTTTGGAGTCGTGCATGATTGATAGCAAACGTTTCATATGGATGGATTACGATGAGCTAATGACATTTAAGATTAATATTCATGATGCAAACCATGTTGAGATTGACTACAAGCCAATTGAGGAAGCACTAGATTTACGCTTTAATACTGAACACTAG 2583 0.4154 MHISSKISLEELHAKILRRLGSEDKFINEMMYRMPLNTIDGGLIRYGCCDISNDEDVIMMFDYHRKFPNIHLVELYVVVGDTNIIRHIPSSGGSAPTPIHGVAVVAREEPIVRSMGQPQNDENIVICPSQVVAMLGNVNDYESPIQACNYNEQDFDDDDTHEPFEVPYDDDDDIDGVGVTPISQNVTQPPAQSQVGEVAHYTNLNLAAMGDFNAAGSSRLTVLGDISGEKNICVGQQFPNKESVLLGLKNYSIRRGVEYKVYESDPKKYLVKCKLFGRGCDPTVLVRVLQDSIHEKYGFTPSYRKAWLAKQKAIARIYGDWEESYNELPKWLLAMQHCAPGTVVEIQTAPYYNGNLVDRTCVMFSRVFWSFPACIEGFKQCKRFVSIDGTHLYGKYGGTLLMAIAQDGNSNILPIAFAIVEKETIDAWSFFLTNLRRHVTPQEGILIISDRHAAIKASIDAEGSGWKEPHAYHAYCIRHIASNFALRLKNKEAKRHLVNAAYAKTESEFEYYYGLATGFNPEAHAWMGRIPLRKWAQHADEGRRYGHMTTNLSECVNAVLKGVRNLPITAIVKATYFRLGSLFRKKGKTAQAQIAAGGIFSQFLLNEIQKNREEMMGNMFVSSFSRSDQAFTVQVQGPVGTWSQRTFAVRLGERKCDCGYFQALHFPCPHVLAACSYPEVRLDWSSYVDDVYRMENVMNVYAMEFPPIANESSWPSFSGPRLRPDPELRRAKEGRPLSTRIRNEMDEVETGRGKHCGLCRQQLNSRFTTSYFAQLPNQVKFRIPTGSEWLMKVEERENEVWLTDGWTDFLESCMIDSKRFIWMDYDELMTFKINIHDANHVEIDYKPIEEALDLRFNTEH* 861
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g1265 860 PANTHER - 297 552 - -
Aev03g1265 860 Pfam MULE transposase domain 385 483 IPR018289 -
Aev03g1265 860 Pfam SWIM zinc finger 631 676 IPR007527 GO:0008270
Aev03g1265 860 SMART 26again6 654 681 IPR006564 GO:0008270
Aev03g1265 860 PANTHER POLYPROTEIN, PUTATIVE-RELATED 297 552 - -
Aev03g1265 860 ProSiteProfiles Zinc finger SWIM-type profile. 647 679 IPR007527 GO:0008270
Aev03g1265 860 SUPERFAMILY DNA-binding pseudobarrel domain 759 839 IPR015300 -
Aev03g1265 860 Gene3D - 752 840 IPR015300 -
Aev03g1265 860 Pfam MuDR family transposase 232 281 IPR004332 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g1265 Aev-Chr3 12043243 12046837 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g1265 760 845 B3 DNA Binding Superfamily AT3G18990 24.419 2.32e-06 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g1265 - - aip:107621404 674.855