Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g1203 ATGTCTAATCCCAAAACACACGCCGCACAGGAACCAAACACCTCCGCGGATCCCCAACTCCCGCTCCGAAACCTCTCCCAGATCCGAACCCGAATCGATTCCCTACGTTGCATCCTATCCGATTCAATAGACTCCAATTCTTCCCTCACCGACAAGCAAACCGCCGCCGTCTCAGAGAACATCGCTGCCGCTATCCACCACACCATCGCCAACGCCGCCGCCATCCTCTCCTTCTCCCGCACCTTCGATTCCCCTGACTCCGCCGCCCCGCCGCCGTCCATGTTCCCTGCCTCTAGGGTTGACCTCTCCTCAACCACCGCCACCACTGCCGCCGAAAACGCCAGACGCGCTCCAGATCCTAAAATCGAAGCACCGGACGACGACGACGCCACCGCCGACGACGAGATCGTGGAGCTCGACGCCGTGGAGCTTCTCGCGGAGCACATCCACTTTTGCGAGATCTGCGGGAAAGGCTTCCGCCGCGACGCGAACCTCCGGATGCACATGCGCGCTCACGGGAACCAGTTCAAGACGCCGGAAGCTCTAGCGAAACCGGAATCCGCCACCTACGTAAACGGAGCCGCCGTGAACCGCCGATTCTCGTGTCCGTTCGAAGGCTGCAACAGGAACAAACACCACCGGAAGTTCAGGCCTCTGAAATCGATCGTCTGCGTGAAGAATCACTTCAAGAGAAGCCACTGCCCGAAGATGTACTCGTGCAATCGGTGCCACAAGAAGAATTTCTCGGTTCTCTCGGATCTGAAAAGCCACATGAAGCACTGCGGAGAATCGAAGTGGAGGTGCTCGTGCGGAACCACGTTCTCGAGGAAGGACAAGCTTTTCGGGCACATTGCACTGTTCGAAGGGCACATGCCCGCGCTGCCCGCGGAGGAGGAGGAGGAAGAGAAGGGGAAGAAGGTGGTGATTGTAGACGAGGAGGAGGAGGATGATGAGGATTTGGCGGCGGTTGTGACTGAGAGTGATTTTGGTAATTGTTTTCTGGATGATAATAATAATTGTGATTTGCCTGATGGGTTCTTTGATGATTTGGATGATTTGAGCTCTTTGGGGTTCCCCTTAGTTTAA 1086 0.5635 MSNPKTHAAQEPNTSADPQLPLRNLSQIRTRIDSLRCILSDSIDSNSSLTDKQTAAVSENIAAAIHHTIANAAAILSFSRTFDSPDSAAPPPSMFPASRVDLSSTTATTAAENARRAPDPKIEAPDDDDATADDEIVELDAVELLAEHIHFCEICGKGFRRDANLRMHMRAHGNQFKTPEALAKPESATYVNGAAVNRRFSCPFEGCNRNKHHRKFRPLKSIVCVKNHFKRSHCPKMYSCNRCHKKNFSVLSDLKSHMKHCGESKWRCSCGTTFSRKDKLFGHIALFEGHMPALPAEEEEEEKGKKVVIVDEEEEDDEDLAAVVTESDFGNCFLDDNNNCDLPDGFFDDLDDLSSLGFPLV* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g1203 361 MobiDBLite consensus disorder prediction 108 130 - -
Aev03g1203 361 PANTHER ZINC FINGER PROTEIN STOP1 HOMOLOG 7 350 - -
Aev03g1203 361 SUPERFAMILY beta-beta-alpha zinc fingers 147 173 IPR036236 -
Aev03g1203 361 ProSiteProfiles Zinc finger C2H2 type domain profile. 150 177 IPR013087 -
Aev03g1203 361 ProSitePatterns Zinc finger C2H2 type domain signature. 152 172 IPR013087 -
Aev03g1203 361 SMART c2h2final6 200 233 IPR013087 -
Aev03g1203 361 SMART c2h2final6 238 260 IPR013087 -
Aev03g1203 361 SMART c2h2final6 150 172 IPR013087 -
Aev03g1203 361 Gene3D Classic Zinc Finger 150 173 - -
Aev03g1203 361 PANTHER PROTEIN SENSITIVE TO PROTON RHIZOTOXICITY 1 7 350 IPR044300 GO:0010044|GO:0010447
Aev03g1203 361 MobiDBLite consensus disorder prediction 1 23 - -
Aev03g1203 361 Gene3D Classic Zinc Finger 224 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g1203 Aev-Chr3 11086246 11087331 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g1203 135 298 C2H2 Transcription Factor Family AT1G34370 65.663 9.87e-81 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Aev03g1203 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g1203 - - cam:101491258 361.688