Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g1164 ATGATAGGAGAAGAAGGGAAGAACAAACCTTCATTAGGTGGCAATGAAATTGCTAAGAGAACCTATTCTCGTTCTGTTTCATGGACTGATCGGTCTCCGAGTAGCCGGAACAAGCCGCCACCGGCACCGCCTTCTTCTAGCAGCAAAACTAGGCCATTGTTGCCACCACTTCAGCCTCTTTCAATCAACAAGCGAAGCGTCGAGGAATGGCCTAGTGCAGGTTCTGATGATCTTGGTGTTTGGCCACTTCCTCAGACGCCAAGAGGGTCAATTAGACCCTATGATTCGGGTCAACCCACCAAGGATTTTCAGTTCAAGAGGGACAAATTAGCCTTCTTTGACAAGGAATGTTCAAGGATTGCAGAGCACATATACTTGGGGAGTGACACAGTTGCAAAGAACCATGACCTTCTGAGGCAGAACAGGATCACTCATGTCCTAAACTGTGTTGGTTTCGTTTGCCCTGAGTATTTCAAGAGCGATTTTGTGTACAAAACACTCTGGTTGCAGGATAGCCCCACAGAAGATATCACAAGCATCCTCTATGATGTGTTTGATTACTTTGAAGATGTTAGGGAGCAAGGAGGGCGTGTTCTTGTTCATTGTTGTCAAGGTGTTTCAAGATCGACATCTCTTGTGATTGCTTATCTTATGTGGAGGGAAGGACAAAGCTTTGAAGATGCTTTTCAGTATGTGAAAACTGCAAGAGGTGTCACAAATCCAAACATGGGTTTTGCTTGTCAACTTCTGCAATGTCAGAAAAGGGTTCATGCTATGCCTGCAAGTCCAAATTCTATTGTTAGGATGTACCGGATGGCGCCTCATTCACCCTATGATCCTCTTCATTTGGTCCCTAAAATGGTGAACCAGCCGAGTGCACGAGCCCTTGATTCTCGTGGTGCTTTCGTTGTGCATATTCCTTCTGCTATTTATGTATGGAGTGGAAAATATTGCAGCTCTGCCATGTCCTGCAATGCAAGAGACTCGGCCTTTCAGGTCATCCGTTATGAAAGCGCCAAGGGTCCAATTTTGACAATCCATGAGGGTCAAGAGCCACCCCAGTTTTGGATTGCTCTTTCAGGTAAATCTGACAAAGAAGGGGTCATGGTCATGGAAGAGTCTATTTCAGATCTGCAAGGTACAAGGAAAGTTGATGCATATGATTCGGATTTCGAGATCTTCCTCAAGGCACTTGCTGGTGAAGTTGTTCCACCTTTCTCTGTGGCTAATTCAGGGTCAGAAACTTGCCTTCCTGCTAAAGAACACGGTTGGAGAATACTGAGGCGGAAGTTGGCGTGTGGTGTCATGAAAGAATTTTTAAAATCCCCTAAATGGAACTGTGAAGCAATCTCTTGCAATGATTCATCCAATTCCGGTGCTAATATGGAAGAAGAAAACCAACCATCATCGAATTATCCCTGTGGTTCGCCGGAATCCTTCGAATGTTATCTGAATAACAGTACGGACGATGCAATTGAAGATACTCATGTTGCGATTGACTCATCAGTTCTTGCCACATCAAATCCATTTCCTTGTTTTCTTAGCAGAAGTCCAAAATTCAATTCCAAGTCACCAACACTTTCGCCGTCAAGTTCCGATTACGCCAGTTCCTTTACATTTTCTCCTTCCTCTACCAACTGGTCAGATTTGTCATTTGTGTCTTCTAGGCAGCCATCACCTTCCGGCATGGAATCAGCCGAACCCTTTTATGCAAAAGATGCATCTTTCTCAGAGTGTTCCTCTTTATTTCAAAAAGATGTTTCTTCAACATCAGAGGTATTTTTGGCTAATCACACCTTTCTGAAAGGATCATCCCTTTCCATCGCGGAGCGCAGAGGGAGTAATCCACCACCTCGCATGTTGCTGTCGTCGATCAACGAATCCTCTCATGTTCATAAGAACCTGGAGGATTACACGTATTAA 1923 0.4451 MIGEEGKNKPSLGGNEIAKRTYSRSVSWTDRSPSSRNKPPPAPPSSSSKTRPLLPPLQPLSINKRSVEEWPSAGSDDLGVWPLPQTPRGSIRPYDSGQPTKDFQFKRDKLAFFDKECSRIAEHIYLGSDTVAKNHDLLRQNRITHVLNCVGFVCPEYFKSDFVYKTLWLQDSPTEDITSILYDVFDYFEDVREQGGRVLVHCCQGVSRSTSLVIAYLMWREGQSFEDAFQYVKTARGVTNPNMGFACQLLQCQKRVHAMPASPNSIVRMYRMAPHSPYDPLHLVPKMVNQPSARALDSRGAFVVHIPSAIYVWSGKYCSSAMSCNARDSAFQVIRYESAKGPILTIHEGQEPPQFWIALSGKSDKEGVMVMEESISDLQGTRKVDAYDSDFEIFLKALAGEVVPPFSVANSGSETCLPAKEHGWRILRRKLACGVMKEFLKSPKWNCEAISCNDSSNSGANMEEENQPSSNYPCGSPESFECYLNNSTDDAIEDTHVAIDSSVLATSNPFPCFLSRSPKFNSKSPTLSPSSSDYASSFTFSPSSTNWSDLSFVSSRQPSPSGMESAEPFYAKDASFSECSSLFQKDVSSTSEVFLANHTFLKGSSLSIAERRGSNPPPRMLLSSINESSHVHKNLEDYTY* 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g1164 640 MobiDBLite consensus disorder prediction 18 35 - -
Aev03g1164 640 ProSiteProfiles Dual specificity protein phosphatase domain profile. 116 258 IPR020422 GO:0006470|GO:0008138
Aev03g1164 640 CDD DSP 117 251 - -
Aev03g1164 640 Gene3D Severin 267 366 IPR029006 -
Aev03g1164 640 ProSitePatterns Tyrosine specific protein phosphatases active site. 200 210 IPR016130 GO:0016311|GO:0016791
Aev03g1164 640 MobiDBLite consensus disorder prediction 36 50 - -
Aev03g1164 640 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 175 236 IPR000387 GO:0016311|GO:0016791
Aev03g1164 640 SMART dsp_5 116 255 IPR020422 GO:0006470|GO:0008138
Aev03g1164 640 Gene3D Protein tyrosine phosphatase superfamily 99 258 IPR029021 -
Aev03g1164 640 PANTHER MKPA PROTEIN 1 624 - -
Aev03g1164 640 SUPERFAMILY Actin depolymerizing proteins 262 365 - -
Aev03g1164 640 PANTHER PROTEIN-TYROSINE-PHOSPHATASE MKP1 1 624 - -
Aev03g1164 640 Pfam Dual specificity phosphatase, catalytic domain 124 254 IPR000340 GO:0008138|GO:0016311
Aev03g1164 640 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 107 258 IPR029021 -
Aev03g1164 640 MobiDBLite consensus disorder prediction 1 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g1164 Aev-Chr3 10532888 10536534 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g1164 1 152 Protein tyrosine phosphatase (PTP) family AT3G55270 40.212 4.63e-31 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g1164 - - gmx:100775448 896.345