Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g1141 ATGATGGCTCCTACCTGTGATTCAATTTCAGCCATTTGTCCTGAAAAGGAGACATGGCGTATCAAAGCTCGTGTGGGTGATAGAATCCAAGCAAGCATCAGAAAACCATTGCTCGATAAATTCAAGGAAAGCTTTGTTGAAGGGGGTGTGTACAAAATTAGTCATTTTGGTGTAGTCCCAAGTAGTAGATACTACAAAACTACTAGACATGACTACAAGATAAATTTCACATTCAGGACAACTGTTGTTTCTGTTGTGGATAATTCAATCACGCGTTGCTCTTTTTCTCTGACTACAATTGAAGATTTGTTGAAAATGGAGTCTGATTCAGACTATTTGGTTGATGTTATTGGATTACTCACGGCTGTGAGTGATGACAAAGAATATGAAAAGGAGGAACAACCAGTAGTTATCCTCCAATTTGTAAAAGTTAAGATGTTCAGAGGTAAAGTAGGATTGCAAAATGTCATGTATGCAACAAAACTTCTGTTTAATCCTGATATTGCTGAAGTTGTGGAGTTCAAACACAGCTTGATTGAAGGTGGTGTTTTTGCATCAGAACCTTTGTTTGTTGGAGGTGAAGGAATCACTCAATCTCTTGAGGATGAATTCATGAAGAATACTCCTAGGATCAATATAGAAGAATTACATGAAAACAAAAAAACTTCTTATTTTTTTAAGAAGACTTGTGCTCAATTCTGGACTGAGCATGAAAAAGATGCTGAGGATTTTGCTTCCCAAGTTATTGAAACTTCTGAAAATGATATCACAGAAAAGGTGAAGTATGCTGCTAGATATGATTCTTTGAAAAGGAACCTAGATGTTGATTTTGTTACATCGTTGGAGGCTAAGAGTTGTGTTGGAACTAAATGTTCCAAGCCACCAGAGCTGGTCTCTGTCCCTCGTTGTCCTCATCGCCCTGTCGCTGCCGCCGCCGCTGGATCTGACCACTATCTCTACCTCATGGTCCTTTATCTCTATTCTTTCTCCATCACCTCTACTCCCTCTCTCAGTTGA 1017 0.3904 MMAPTCDSISAICPEKETWRIKARVGDRIQASIRKPLLDKFKESFVEGGVYKISHFGVVPSSRYYKTTRHDYKINFTFRTTVVSVVDNSITRCSFSLTTIEDLLKMESDSDYLVDVIGLLTAVSDDKEYEKEEQPVVILQFVKVKMFRGKVGLQNVMYATKLLFNPDIAEVVEFKHSLIEGGVFASEPLFVGGEGITQSLEDEFMKNTPRINIEELHENKKTSYFFKKTCAQFWTEHEKDAEDFASQVIETSENDITEKVKYAARYDSLKRNLDVDFVTSLEAKSCVGTKCSKPPELVSVPRCPHRPVAAAAAGSDHYLYLMVLYLYSFSITSTPSLS* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g1141 338 CDD RPA1_DBD_B_like 121 179 - -
Aev03g1141 338 PANTHER REPLICATION FACTOR A 1, RFA1 26 131 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Aev03g1141 338 Gene3D - 124 185 IPR012340 -
Aev03g1141 338 SUPERFAMILY Nucleic acid-binding proteins 95 178 IPR012340 -
Aev03g1141 338 Pfam Domain of unknown function DUF223 24 112 IPR003871 -
Aev03g1141 338 PANTHER REPLICATION PROTEIN A 70 KDA DNA-BINDING SUBUNIT A 26 131 - -
Aev03g1141 338 SUPERFAMILY Nucleic acid-binding proteins 9 87 IPR012340 -
Aev03g1141 338 CDD RPA1_DBD_A_like 26 82 - -
Aev03g1141 338 Gene3D - 26 87 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g1141 Aev-Chr3 10204107 10209524 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g1141 4 124 Core DNA Replication Machinery Family AT4G19130 26.000 5.43e-08 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g1141 - - ahf:112791275 213.772