Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g1013 ATGCGTTGTTGTTCTGTGCAGGGAGACTTTCATGTTCTGAGTGTCTTCTCCAGTATAGATCTGGAGAGGGGGGGCACTGTCCTGGACTCATTTGATTTGGGAGAAAGAAATGGTGATGGGAAAGCTCAAGATTCAGAGCCTCTAACTCCTCATTCAGTTTTGAAGATGGGATTGAGAGATCGTAGCAGCAGCATGGAGGATCCAGATGGAACATTAGCAAGTGTTGCTCAATGCATTGAGAAGCTGCGTCAGAGCTCATCTTCTATGCAAGAGAAAGAGTATTCCCTGAAGCAGTTATCAGAGCTTATTGATATGCGTGAAAATGCTTTCAGTGCAGTTGGATCCCACTCTCAAGCAGTTCCAGTACTTGTTTCCCTTCTCCGGTCAGGATCTTTGAATGTGAAGATACAGGCAGCAACTGTCCTTGGCTCCCTTTGTAAAGAAAATGAGCTGAGGGTAAAAGTCTTGCTTGGAGGGTGCATTCCTCCATTGCTTAGTCTACTGAAGTCCAGTTCTGCCGAAGGTCAAGTAGCTGCTGCCAAGACTATTTATGCTGTATCTCAAGGTGGTGCTAAAGATCACATTGGATCAAAGATATTTTCAACTGAAGGAGTTGTGCCAGTGCTCTGGGAGCAGTTGCAGAAGGGCTTGAAGAACGGAAATGTAATTGACAATTTATTGACTGGAGCGTTGAAAAATCTCTCCAGCAGTACTGAGGGATTCTGGAATGCCACGATACAAGCTGGAGGAGTGGATATATTAGTGAAGTTACTGACAGCAGGACAGTCTGGCACTCTAGCCAATGTGTGCTTTCTACTTGCCTGCATGATGATGGAGGATGCATCTGTTTGTTCGAAAGTGTTGACATCAGATGTGACAAAGCAACTCCTCAAGCTGTTGGGCCCTGGTAATGATGCCCCTGTTAGAGCTGAAGCCGCTGGAGCTCTTAAATCTCTGTCTGCTCAGTGCAAAGATGCAAGACGGGAGATAGCCAATTCTAATGGCATTCCTTCTTTGATCAATGCAACCATAGCTCCTTCCAAAGAGTTCATGCAAGGTGAGCATGCTCAAGCATTACAGGAGAATGCTATGTGTGCTCTAGCGAACATCTCTGGTGGTTTGTCTTATGTCATCTCCAGCCTTGGTCAAAGCCTTGAATCATGCATCTCACCTACCCAAATTGCTGACACATTAGGGGCTTTAGCTTCAGCTCTTATGATATATGATAACAAGGCAGAATCTAATAGAGCATCAGATCCTTTGGTAGTTGAGCAGATGTTGCTCAGTCAATTTAAACCTCAGTTGCCCTTAATTGTGCAGGAGCGGACCATTGAAGCCCTGGCTAGTTTGTATAGTAATCCCATACTCTCAATTAAAATTGCAAATTCTGATGCAAAACGTTTACTTGTGGGTTTAATAACAATGGCTGCCAACGAAGTGCAAGATGAGCTGCTAAAAGCTCTCTTGACACTGTGCAACACTGAAGGCAGTCTATGGCGTGCACTTCAAGGCCGTGAAGGAATTCAGCTGTTGATAGCACTTCTGGGGCTTTCATCAGAACAGCAACAAGAATGTGCAGTTGCCCTTCTTTGCCTTCTATCTAATGAAAATGATGAAAGTAAATGGGCCATAACTGCTGCTGGTGGTATACCTCCTCTTGTTCAAATTTTGGAGTCAGGATCTGCAAAAGCAAAAGAGGATTCAGCAACAATCCTTAGGAACCTATGCAATCACAGCGAGGATATACGTGCATGTGTTGAAAGTGCTGATGCTGTTCCTGCATTGTTGTGGCTTTTGAAGAATGGAAGTGCAAATGGGAAAGAGATTGCTGCAAAGACCTTGAATCACTTAATCCATAAATCTGATACAGCAACTATTAGTCAGCTCACAGCATTATTGACAAGTGATCTACCAGAATCTAAGGTTTATGTTTTAGATGCTTTGAGAAGTATGCTTTCTGTTGTTCCCCTTAGTGATATTTTACGTGAAGCTAGTGCTGCTAGTGATGCAATCAATACCATGATAAGAATATTGAGCTCAACCAAGGAAGAAACTCAGGCAAAGTCTGCATCAGCTTTAGCAGGAATTTTTGAAACAAGGAAAGATGTGCGTGAAAGCAGCATTGCTGTTAAAACTCTTAGATCAGTCATGAAGTTGCTTCATGTTGAACCTGAAAGCATCTTAATGGAGTCCTCACGCTGCCTGGCTGCAATATTTCTTTCCATAAAAGAGAACAGGGATGTAGCTGCTATAGCTAGAGATGCATTATCTCCACTAGTTGCACTTGCTAACTCTTCAGTTTTGGAAGTGGCAGAGCTGGCAACCTGTGCTGTGGCAAATCTTATTTTAGATAATGAAATTGCAGAGAAAGCTGTTGCAGAAGAAGTAATCATGCCTGCTACCAGAGTATTACGTGAAGGCACAATTGCTGGAAAAACACATGCTGCAGCAGCAATTGCCCGTCTCTTACATTCTAGGCCGGTTGATTATGCTGTAACTGATTGTGTGAATCGTGCTGGCACTGTTCTCGCATTAGTTTCTTTCTTGGATTCTGCTATTAATGGATCTGCCACTACATCTGATGCTCTAGATGCACTTGCCATTCTATCCAGGTCAGAAGAGACCAACACACATAGTAAACCAGCATGGACTGTTTTGGCTGAATTCCCTAAAAGCATAAGCCCAATAGTCCTGTCTATTGCCGACTCAACACCAATATTGCAGGATAAAGCTATTGAGATATTGTCTCGATTATGCAAGGATCAGCCTCTTGTCTTAGGTGACACTGTTGCAACTTACTCTGGATGTATATCTTCAATAGCTAAGAGGATAATCAGTTCTACTCCCGCAAATGTAAAAGTAAAAAATGGGGGAGCTGCAGTTCTTGTTTGTGCTGCAAAAGTAAATCATCAGAGACTCATGGAGGATCTCAATTTATCAAACTTGTGTGCTGATCTTGTTCGGTCTCTTGTTGATGTGGTTATTTCTTCACACTCTTCTTTGGGCAATCAGGGTGATGGCAATAAGGAAGTAATAAGCATTTGCAGGTGTACAAAAGAACAGCCCAATGATGGTCAATCCAACACTGGCACTGCTATTATATCTGGTGCCAACTTAGCTATATGGTTACTGTGTATTCTTGCTTGCCATGATGAAAATAGTAGAATTGCAATAATGGAGGCTGGAGCAATTGACGTTGTCACTGACAGGATCTCAAATTATTTTTCACAATATAGTCAGATTGATGATAAAGAAGACAGCAGTATGTGGATTTGTGCTCTGTTGTTAGCAGTGCTATTCCAAGATAGAGATATCATACGTGCAAATGCAACCATGAAATCTATACCAGCACTTGCCAATTTATTGAAGTCAGAGGAGTCAGCAAGTAAATATTTCGCAGCACAATCAATAGCTAGCTTGGTCTGTAATGGTAGCAGGGGAACACTTCTTTCTGTAGCAAATTCTGGGGCTGCAGGTGGACTTATCTCGTTGCTTGGCTGCGATGACACTGATATCGAGGATCTTCTGGAATTGTCGGAGGAATTTTCTTTGGTGCGTTATCCTGATCAAGTTGCTCTTGAGAGGTTGTTTAGAGTTGATGACATAAGAGTTGGTGCCACTTCTCGGAAGGCAATACCTGCCCTAGTTGATCTGCTAAAACCAATTCCAGATCGCCCAGGAGCACCATTTTTAGCACTTGGGCTTCTGACTCAGCTTGCTAGAGATTGTCCATCAAATAAGATTGTAATGGTAGAGTCTGGGGCCTTAGAGGCACTTACCAAGTATCTTTCATTGGGTCCCCAGGATGCAACTGAAGAAGCTGCTACAGATCTATTAGGAATTTTATTTAGCAGTGCTGAGATACGGAGACATGAATCAGCATTTGGTGCTGTTACTCAACTTGTAGCTGTCCTACGTTTGGGAGGAAGAGCTGCAAGGTATAGTGCTGCAAAAGCCTTGGAAAGTTTATTCACTGCTGACCATATTAGAAATGCAGATACTGCTCGACAAGCTGTTCAACCCCTGGTAGAGATTCTTAATACTGGTTTGGAGAGGGAGCAGCATGCTGCGATCGCTGCGTTGGTTAGATTACTCAGTGAAAACCCTTCAAAAGCACTTGCTGTTGCAGATGTCGAGATGAATGCAGTGGATGTTCTTTGCAGGATCCTTTCATCAAATTGTTCAATGGATCTCAAAGGAGATGCTGCTGAACTGTGTTGTGTTCTTTTTGGAAATACAAGGATTCGGTCCACAATGGCTGCTGCGCGTTGTGTTGAACCTTTGGTCTCTCTCCTTGTAAGTGAGTTTAGTCCAGCTCAACACTCAGTTGTTCGGGCATTGGATAGGCTTGTTGATGATGAGCAACTAGCTGAATTAGTTGCTGCACATGGTGCAGTTATTCCTCTTGTTGGCCTACTCTATGGTAGGAATTATGTACTTCATGAAGCCATTTCCAGAGCTCTGGTCAAGTTAGGAAAAGACAGGCCTGGATGTAAAGTGGAAATGGTGAAAGCTGGAGTTATTGAAAGCACACTTGATATCCTTCATGAGGCACCTGATTATCTATGTGCAGCTTTTGCAGAACTGTTGCGTATATTGACCAATAATGCTAGCATAGCCAAAGGTCCATCTGCTGCTAAAGTGGTTGAGCCCCTCTTTTCGCTGCTGACAAGACAAGAATTTGGACCTGATGGACAGCATAGTGCACTGCAGGTTTTGATCAATATATTAGAACATCCACAGTGTCGTGCTGATTACACATTGACTTCTCACCTAGCTATTGAGCCACTTATCCCTTTGCTTGATTCTCCAATATTAGCAGTGCAACAGTTGGCTGCTGAGCTTCTCTCACATCTACTTTTAGAAGAACACCTTCAGAAGGATCCAGTGATTCAGCAAGTGATCGGTCCTCTTATACGAGTTCTTGCTTCTGGTATACATATTTTGCAGCAGAGAGCTGTAAAGGCCTTAGTCAGTATTGCATATATGTGGCCTAATGAAATTGCAAAAGAGGGTGGTGTTATTGAAATCTCCAATGTGATATTGCAAGCTGATCCATCCATTCCTCATGCTTTATGGGAGTCTGCTGCCTCTGTTCTGGCATGTATTCTGCAATATAGTTCCGAGTTCTACTTGGAAGTACCTGTTGCTGTCTTAGTAAGGTTGCTTCGATCTGGCTCTGAGAGCACAGTTATTGGTGCATTAAATGCTCTTCTTGTGTTGGAAAGTGATGATGGAACTAGTGCAGAAGCAATGGCTGAAAGTGGTGCTATAGAGGCTCTCTTGGAGCTTCTAAGATCTCATCAGTGTGAGGAAACTGCTGCAAGACTCTTAGAAGTATTGCTGAACAATGTAAAGATCAGAGAAACGAAAGTTACTAAATCAGCCATTTTACCATTATCCCAGTACCTCTTGGACCCACAAACCCAAGCACAGCAGGCACGGTTATTGGCCACTTTGGCTCTTGGTGATCTATTCCAGAATGAGGGCCTTGCTCGGTCAAGTGATTCTGTTTCAGCTTGCCGTGCTTTAGTGAATGTGCTTGAAGAGCAACCAACAGAAGAAATGAAAGTTGTAGCCATATGTGCTTTGCAAAACCTTGTTATGTACAGCCGATCCAATAAAAGAGCAGTTGCAGAGGCTGGTGGTGTTCAGGTTGTATTGGATCTGATAGGTTCAAGCGATCCTGAAACATCTGTTCAGGCTGCAATGTTTATTAAACTTCTCTTTTCAAATCACACTATTCAAGAGTATGCTTCTAGTGAAACAGTCAGAGCAATAACTGCTGCAATCGAAAAGGATTTATGGGCTACTGGAACTGTAAATGAAGAGTATCTGAAAGCCTTAAATTCTCTATTTAGCAACTTCCCGAGATTGAGAGCAACTGAACCAGCAACACTTAGCATTCCTCATCTGGTTACATCCTTAAAGACAGGCTCCGAGGCTGCTCAAGAAGCTGCCTTGGACGCACTTTCTCTGCTGCGGCAAGCTTGGTCAGCATGCCCTGCAGAAGTTTCAAGAGCTCAGTCCATAGCGGCTGCAGATGCTATTCCTTTGCTGCAGTATTTAATCCAGTCTGGCCCGCCTCGGTTTCAGGAGAAGGCAGAATTCTTATTGCAGTGTTTGCCAGGGACGTTGGTTGTGATAATCAAGCGCGGTAATAATATGAAGCAGTCTGTTGGAAACCCAAGTGTTTATTGTAAGCTCACACTTGGCAACACTCCTCCAAGGCAGACCAAGGTGGTCTCAACTGGTCCTAATCCGGAATGGGACGAGAGCTTTTCATGGGCCTTTGAGAGTCCTCCAAAAGGCCAGAAGCTTCATATTTCTTGCAAAAACAAGAGCAAAATGGGAAAGAGTTCATTCGGCAAAGTGACGATCCAAATCGATCGGGTGGTAATGCTAGGAGCAGTATCTGGAGAGTACACTCTGTTGCCGGAAAGTAAAAGTGGCCCCTCAAGGAATTTAGAAATAGAATTTCAGTGGTCCAACAAGGAATAA 6501 0.4336 MRCCSVQGDFHVLSVFSSIDLERGGTVLDSFDLGERNGDGKAQDSEPLTPHSVLKMGLRDRSSSMEDPDGTLASVAQCIEKLRQSSSSMQEKEYSLKQLSELIDMRENAFSAVGSHSQAVPVLVSLLRSGSLNVKIQAATVLGSLCKENELRVKVLLGGCIPPLLSLLKSSSAEGQVAAAKTIYAVSQGGAKDHIGSKIFSTEGVVPVLWEQLQKGLKNGNVIDNLLTGALKNLSSSTEGFWNATIQAGGVDILVKLLTAGQSGTLANVCFLLACMMMEDASVCSKVLTSDVTKQLLKLLGPGNDAPVRAEAAGALKSLSAQCKDARREIANSNGIPSLINATIAPSKEFMQGEHAQALQENAMCALANISGGLSYVISSLGQSLESCISPTQIADTLGALASALMIYDNKAESNRASDPLVVEQMLLSQFKPQLPLIVQERTIEALASLYSNPILSIKIANSDAKRLLVGLITMAANEVQDELLKALLTLCNTEGSLWRALQGREGIQLLIALLGLSSEQQQECAVALLCLLSNENDESKWAITAAGGIPPLVQILESGSAKAKEDSATILRNLCNHSEDIRACVESADAVPALLWLLKNGSANGKEIAAKTLNHLIHKSDTATISQLTALLTSDLPESKVYVLDALRSMLSVVPLSDILREASAASDAINTMIRILSSTKEETQAKSASALAGIFETRKDVRESSIAVKTLRSVMKLLHVEPESILMESSRCLAAIFLSIKENRDVAAIARDALSPLVALANSSVLEVAELATCAVANLILDNEIAEKAVAEEVIMPATRVLREGTIAGKTHAAAAIARLLHSRPVDYAVTDCVNRAGTVLALVSFLDSAINGSATTSDALDALAILSRSEETNTHSKPAWTVLAEFPKSISPIVLSIADSTPILQDKAIEILSRLCKDQPLVLGDTVATYSGCISSIAKRIISSTPANVKVKNGGAAVLVCAAKVNHQRLMEDLNLSNLCADLVRSLVDVVISSHSSLGNQGDGNKEVISICRCTKEQPNDGQSNTGTAIISGANLAIWLLCILACHDENSRIAIMEAGAIDVVTDRISNYFSQYSQIDDKEDSSMWICALLLAVLFQDRDIIRANATMKSIPALANLLKSEESASKYFAAQSIASLVCNGSRGTLLSVANSGAAGGLISLLGCDDTDIEDLLELSEEFSLVRYPDQVALERLFRVDDIRVGATSRKAIPALVDLLKPIPDRPGAPFLALGLLTQLARDCPSNKIVMVESGALEALTKYLSLGPQDATEEAATDLLGILFSSAEIRRHESAFGAVTQLVAVLRLGGRAARYSAAKALESLFTADHIRNADTARQAVQPLVEILNTGLEREQHAAIAALVRLLSENPSKALAVADVEMNAVDVLCRILSSNCSMDLKGDAAELCCVLFGNTRIRSTMAAARCVEPLVSLLVSEFSPAQHSVVRALDRLVDDEQLAELVAAHGAVIPLVGLLYGRNYVLHEAISRALVKLGKDRPGCKVEMVKAGVIESTLDILHEAPDYLCAAFAELLRILTNNASIAKGPSAAKVVEPLFSLLTRQEFGPDGQHSALQVLINILEHPQCRADYTLTSHLAIEPLIPLLDSPILAVQQLAAELLSHLLLEEHLQKDPVIQQVIGPLIRVLASGIHILQQRAVKALVSIAYMWPNEIAKEGGVIEISNVILQADPSIPHALWESAASVLACILQYSSEFYLEVPVAVLVRLLRSGSESTVIGALNALLVLESDDGTSAEAMAESGAIEALLELLRSHQCEETAARLLEVLLNNVKIRETKVTKSAILPLSQYLLDPQTQAQQARLLATLALGDLFQNEGLARSSDSVSACRALVNVLEEQPTEEMKVVAICALQNLVMYSRSNKRAVAEAGGVQVVLDLIGSSDPETSVQAAMFIKLLFSNHTIQEYASSETVRAITAAIEKDLWATGTVNEEYLKALNSLFSNFPRLRATEPATLSIPHLVTSLKTGSEAAQEAALDALSLLRQAWSACPAEVSRAQSIAAADAIPLLQYLIQSGPPRFQEKAEFLLQCLPGTLVVIIKRGNNMKQSVGNPSVYCKLTLGNTPPRQTKVVSTGPNPEWDESFSWAFESPPKGQKLHISCKNKSKMGKSSFGKVTIQIDRVVMLGAVSGEYTLLPESKSGPSRNLEIEFQWSNKE* 2167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g1013 2166 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2043 2163 IPR035892 -
Aev03g1013 2166 Gene3D - 1713 1831 IPR011989 -
Aev03g1013 2166 SMART arm_5 1412 1452 IPR000225 GO:0005515
Aev03g1013 2166 SMART arm_5 1623 1662 IPR000225 GO:0005515
Aev03g1013 2166 SMART arm_5 537 577 IPR000225 GO:0005515
Aev03g1013 2166 SMART arm_5 148 188 IPR000225 GO:0005515
Aev03g1013 2166 SMART arm_5 829 871 IPR000225 GO:0005515
Aev03g1013 2166 SMART arm_5 323 372 IPR000225 GO:0005515
Aev03g1013 2166 SMART arm_5 1453 1493 IPR000225 GO:0005515
Aev03g1013 2166 SMART arm_5 1579 1621 IPR000225 GO:0005515
Aev03g1013 2166 SMART arm_5 1871 1911 IPR000225 GO:0005515
Aev03g1013 2166 SMART arm_5 1198 1241 IPR000225 GO:0005515
Aev03g1013 2166 SMART arm_5 745 783 IPR000225 GO:0005515
Aev03g1013 2166 SMART arm_5 1243 1284 IPR000225 GO:0005515
Aev03g1013 2166 SMART arm_5 280 321 IPR000225 GO:0005515
Aev03g1013 2166 SMART arm_5 1744 1783 IPR000225 GO:0005515
Aev03g1013 2166 SMART arm_5 106 147 IPR000225 GO:0005515
Aev03g1013 2166 SMART arm_5 579 619 IPR000225 GO:0005515
Aev03g1013 2166 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 1210 1254 IPR000225 GO:0005515
Aev03g1013 2166 PANTHER PROTEIN CELLULOSE SYNTHASE INTERACTIVE 1 31 2165 IPR044297 GO:0008017|GO:0010330|GO:0051211|GO:2001006
Aev03g1013 2166 SUPERFAMILY ARM repeat 626 950 IPR016024 -
Aev03g1013 2166 Gene3D - 745 1015 IPR011989 -
Aev03g1013 2166 PANTHER CELLULOSE SYNTHASE-INTERACTIVE PROTEIN 31 2165 - -
Aev03g1013 2166 ProSiteProfiles C2 domain profile. 2025 2142 IPR000008 -
Aev03g1013 2166 Gene3D - 60 429 IPR011989 -
Aev03g1013 2166 Gene3D - 1381 1710 IPR011989 -
Aev03g1013 2166 SUPERFAMILY ARM repeat 68 655 IPR016024 -
Aev03g1013 2166 CDD C2 2046 2136 - -
Aev03g1013 2166 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 548 590 IPR000225 GO:0005515
Aev03g1013 2166 SMART C2_3c 2045 2141 IPR000008 -
Aev03g1013 2166 Gene3D - 1832 2042 IPR011989 -
Aev03g1013 2166 Coils Coil 309 336 - -
Aev03g1013 2166 Gene3D - 626 744 IPR011989 -
Aev03g1013 2166 Gene3D - 430 625 IPR011989 -
Aev03g1013 2166 SUPERFAMILY ARM repeat 1650 2042 IPR016024 -
Aev03g1013 2166 Gene3D C2 domain 2043 2166 IPR035892 -
Aev03g1013 2166 Pfam C2 domain 2044 2140 IPR000008 -
Aev03g1013 2166 Gene3D - 1035 1380 IPR011989 -
Aev03g1013 2166 Pfam Armadillo/beta-catenin-like repeat 116 146 IPR000225 GO:0005515
Aev03g1013 2166 Pfam Armadillo/beta-catenin-like repeat 537 576 IPR000225 GO:0005515
Aev03g1013 2166 SUPERFAMILY ARM repeat 1039 1172 IPR016024 -
Aev03g1013 2166 SUPERFAMILY ARM repeat 1199 1582 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g1013 Aev-Chr3 8480032 8489179 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g1013 508 632 U-box Gene Family AT3G46510 33.333 7.28e-08 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g1013 - - gmx:100816765 3665.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g1013 03 8480032 8489179 Aev03g1013 03 8480032 8489179 PCT