Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g0998 ATGAATTCACCGTCCACGCAGTTTGTTCCCGCCAGAAGGATGGGTGTCTATGATCCTATCCACCAGATTAATATGTGGGGAGACGGCTTCAAAAGTAACGTTAGTTTAAGTCCATCGATTCCCTTAATTGATGAGACAGATATGAAGTTCGATAGTCAGTCAGAGGATGTTTCTCACGGTATGCTCGGAACAAATAACAACTACGACCAAGAAGCTAATAAACCTACTGATAAGATACAAAGACGTCTTGCACAAAATCGAGAGGCTGCTCGCAAGAGTCGTTTACGGAAGAAGGCCTATGTGCAGCAGTTAGAATCAAGTCGTTTGAAGTTGATGCAGTTAGAGCAAGAGCTTGACCGTGCAAGACAGCAGGGAATGTATATAGGTGGCGGGTTGGATTCTAATCAGCTAGGATTTGGTGGACCTATTAATTCAGGAATTGCAACTTTTGAGATGGAGTATGGACACTGGGTAGAAGAGCAAAATAGACAAATCCTAGAGCTGAGAACTGCTTTGAATGCTCATATTGGCGACATGGAGCTCAGGGTACTTGTAGACGGTATAATGAACCACTATTCCGAAATCTTTCGCATGAAATCTGCTGCTGCAAAAGCAGATGTTTTCTATGTCATGTCCGGTATGTGGAAAACGACGGCGGAGAGATTTTTCTTGTGGATCGGAGGCTTTCGTCCCTCTGAGCTTCTAAAGGTTCTTCTTCCTCTGATTGAACCTTTGACAGAGCAACAACGGTTGGATGTCTGTAACCTCGGGCAATCATGTCAGCAAGCAGAAGACGCCCTCTCACAAGGTATGGAGAAATTACAGCAAACACTCGCTGACAGTGTAGCAGCCGGACAACTCGTTGAAGGAAGTTATATTCCGCAGATGGCTTCAGCCATCGAGAAATTGGAAGCACTGGTGAGCTTTGTGAATCAGGCTGACCATCTTCGGCAAGAAACCTTGCAGCAGATGTCTCGAATACTCACAATCCGTCAGGCCGCTCGATGCTTGCTTGCCTTGGGCGAATATTTCCAACGCCTGAGAGCCTTGAGCTCGCTCTGGTCAAATCGCCCCCGCGAACCTGCTTAG 1089 0.4637 MNSPSTQFVPARRMGVYDPIHQINMWGDGFKSNVSLSPSIPLIDETDMKFDSQSEDVSHGMLGTNNNYDQEANKPTDKIQRRLAQNREAARKSRLRKKAYVQQLESSRLKLMQLEQELDRARQQGMYIGGGLDSNQLGFGGPINSGIATFEMEYGHWVEEQNRQILELRTALNAHIGDMELRVLVDGIMNHYSEIFRMKSAAAKADVFYVMSGMWKTTAERFFLWIGGFRPSELLKVLLPLIEPLTEQQRLDVCNLGQSCQQAEDALSQGMEKLQQTLADSVAAGQLVEGSYIPQMASAIEKLEALVSFVNQADHLRQETLQQMSRILTIRQAARCLLALGEYFQRLRALSSLWSNRPREPA* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g0998 362 Pfam bZIP transcription factor 76 111 IPR004827 GO:0003700|GO:0006355
Aev03g0998 362 SUPERFAMILY Leucine zipper domain 78 118 IPR046347 GO:0003700|GO:0006355
Aev03g0998 362 Coils Coil 97 124 - -
Aev03g0998 362 Pfam Seed dormancy control 165 239 IPR025422 GO:0006351|GO:0043565
Aev03g0998 362 SMART brlzneu 74 134 IPR004827 GO:0003700|GO:0006355
Aev03g0998 362 Gene3D - 77 126 - -
Aev03g0998 362 ProSiteProfiles DOG1 domain profile. 147 357 IPR025422 GO:0006351|GO:0043565
Aev03g0998 362 PANTHER TRANSCRIPTION FACTOR TGA9 1 361 - -
Aev03g0998 362 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 81 96 IPR004827 GO:0003700|GO:0006355
Aev03g0998 362 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 76 118 IPR004827 GO:0003700|GO:0006355
Aev03g0998 362 CDD bZIP_HBP1b-like 78 130 - -
Aev03g0998 362 PANTHER TRANSCRIPTION FACTOR TGA1 1 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g0998 Aev-Chr3 8303795 8307357 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g0998 1 362 Calmodulin-binding Proteins AT5G65210 72.554 0.0 545
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Aev03g0998 DOG1 1.5e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g0998 K14431 - gmx:100793353 633.254
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g0998 03 8303795 8307357 Aev03g0998 03 8303795 8307357 PCT