Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g0973 ATGGAGAGGCAACTTGTTGATCAATATCATGAGGAAGGCAGTGAAAAGCGTACCATGTTCAGTTCAGCGAATAATAATGATGAATATGACGATGACGATATTGATGTTTCTGAGTCCGACTGGTCTGATGAAGAAGACGAGGGAACAAGTAGTACTGTGGAGGAGAGTAAGGACCTACCTGATGTGTCGAGAAGAGAAAGTTGTCATGAGGAATTCTGTCGCGAGGATGGTTGTTCCAACGCTAGCGTCGAAGTAAGTGCTGCTGATTTCGATGGTCGAGAGTTTGAAACCGAAGAAGAAGCATATGAATTATATGTTAAATATGCTAGAGTGATTGGATTTGGTGTAAGGAAAAGTGATCTTGCTCGCGACAATTATGGCCGTGCATGTAGGCGTAAATTTGTTTGTAGTAGGGCAGGTGTAAGAGATGGAAAACATTACAACAGAGATGATCGGAAGCGTGAGCACAAGGCAGAGACTAGAAGTGATTGTCAAGCTAGGTTGATGATCTACAGAACAAAGACAATGTCAGGGTGGCGAGTACGGAGATTGATTGAGGAGCACAACCATGAACTGACTAGCCGATGTTTTGCTCATTTGATACCGAACCATCGTCGTATTGACAATGCACACAAGGCACAAATAGAGTCAATGCACAGATATGGGATGCAGACTTCTCAAATAATGGGGTTCATGGCAGGTCAAGCTGGTGGTTATAGAAGTTTAGGATTTTCCAAAAAAGATTTGTATAACTTCATTGATCGTGAGAGGAGGGGAAAAATTATTGAAGGGGATGCGGCGGCTGCTATCAGTTACCTTGAGGGGAGAGCTGATTGTGATGGAGCAACTGTTGCTAGTAAGAGTAGGTGTGCTTATCGAACAACGATGGATGGTATAGAGACAATAACCAGCCATTTGGAAAGTAGTATTTATTTTGGGAAGACTAAAGGAACATGGTCTGAATCAGGCAGAATCGGTGATCCAATAGTTTCGAGAACGAAAGGAGCCCCAAGGATATGGAAGAATGATGGCAAGAAACGTTCTTGTTCGAATTGTGGTGGAGGTGGGCACACAAAGAGGACGTGCCCAGATGCAAAAGAGGCTAGTAAAGTTGTCAGTGATGCTGAAGAGGGTGACAGAGGGATAGGATTAGAAAGTAGTGGGACTGACATCAATGTTTCATCTGCACACAGATCAGGACGTACCATGCAAACCGATGGGGTTAGTGCTATGAGTGACTGCTCCCCAACCTGGACTGGTGGAATGCAGTTTCAACCACAATCGAGTTCGTAG 1293 0.4416 MERQLVDQYHEEGSEKRTMFSSANNNDEYDDDDIDVSESDWSDEEDEGTSSTVEESKDLPDVSRRESCHEEFCREDGCSNASVEVSAADFDGREFETEEEAYELYVKYARVIGFGVRKSDLARDNYGRACRRKFVCSRAGVRDGKHYNRDDRKREHKAETRSDCQARLMIYRTKTMSGWRVRRLIEEHNHELTSRCFAHLIPNHRRIDNAHKAQIESMHRYGMQTSQIMGFMAGQAGGYRSLGFSKKDLYNFIDRERRGKIIEGDAAAAISYLEGRADCDGATVASKSRCAYRTTMDGIETITSHLESSIYFGKTKGTWSESGRIGDPIVSRTKGAPRIWKNDGKKRSCSNCGGGGHTKRTCPDAKEASKVVSDAEEGDRGIGLESSGTDINVSSAHRSGRTMQTDGVSAMSDCSPTWTGGMQFQPQSSS* 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g0973 430 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 24 350 - -
Aev03g0973 430 MobiDBLite consensus disorder prediction 1 63 - -
Aev03g0973 430 MobiDBLite consensus disorder prediction 374 412 - -
Aev03g0973 430 MobiDBLite consensus disorder prediction 387 412 - -
Aev03g0973 430 ProSiteProfiles Zinc finger CCHC-type profile. 349 364 IPR001878 GO:0003676|GO:0008270
Aev03g0973 430 Pfam FAR1 DNA-binding domain 104 193 IPR004330 -
Aev03g0973 430 MobiDBLite consensus disorder prediction 1 17 - -
Aev03g0973 430 SUPERFAMILY Retrovirus zinc finger-like domains 341 367 IPR036875 GO:0003676|GO:0008270
Aev03g0973 430 MobiDBLite consensus disorder prediction 26 51 - -
Aev03g0973 430 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 24 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g0973 Aev-Chr3 8083747 8087549 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aev03g0973 FAR1 3.3e-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g0973 - - aip:107606633 234.958