Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g0971 ATGGTTTCTAGAGAGCAAAAGAGAGCAACAACACTGCATGACAAGCTTCAACTTCTTCGTTCTATTACTAACTCTCATGCGCTAAATAAAACCTCAGTCATAATCGATGCATCAAAGTATATCAAAGATCTAAAGCAAAAGGTAGAAAGACTGAATCAAGACATGGCTGCTGCACATTCATCAAATGATGATGACCATGACCAAATTCCATTGCCCATGGTGACAGTAGAAACCCTAGAAAAGGGGTTTCTTATAAATGTTTTCTCATCAAAGAGCTGCCCGGGTTTGCTTGTTTCAATATTAGAGGCCTTCGAAGAAATCGGTCTTACTGTGTTGGAAGCTAGGGTTTCTTCTACGGACACTTTTCGGTTTCAAGCAGTTGGAGAAGAAAATGAAGAACATGATGATGAGGGTATTGATGCTCAAGCTGTGAAAGTAGCAGTGGGACAAGCAATAAGGAACTGGAGCCAACAAAGTACTGATCAGTGA 489 0.4049 MVSREQKRATTLHDKLQLLRSITNSHALNKTSVIIDASKYIKDLKQKVERLNQDMAAAHSSNDDDHDQIPLPMVTVETLEKGFLINVFSSKSCPGLLVSILEAFEEIGLTVLEARVSSTDTFRFQAVGEENEEHDDEGIDAQAVKVAVGQAIRNWSQQSTDQ* 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g0971 162 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 2 160 - -
Aev03g0971 162 Gene3D - 2 66 IPR036638 GO:0046983
Aev03g0971 162 CDD ACT_UUR-ACR-like 94 152 - -
Aev03g0971 162 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 2 160 - -
Aev03g0971 162 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 3 59 IPR036638 GO:0046983
Aev03g0971 162 Coils Coil 34 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g0971 Aev-Chr3 8056572 8060459 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g0971 5 130 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 29.577 5.04e-07 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g0971 - - gmx:100814138 228.024
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev07g2178 07 22860182 22862204 Aev03g0971 03 8056572 8060459 ECH
Aev06g3055 06 32099153 32103997 Aev03g0971 03 8056572 8060459 ECH
Aev02g1935 02 21197553 21200995 Aev03g0971 03 8056572 8060459 ECH
Aev03g0971 03 8056572 8060459 Aev03g0971 03 8056572 8060459 ECH
Aev03g0971 03 8056572 8060459 Aev07g0541 07 3331300 3332981 PCT