Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g0930 ATGGTTGGGAATTCACCATGTGCTTCATGCAAGCTTCTGAGACGCCGTTGCGCCAAGGATTGCATCTTTGCACCTTATTTCCCTTCCGATGACCCCCAAAAGTTCGCCATAGTTCACAAGGTCTTTGGTGCTAGCAACGTCAGCAAAATGCTTCAGGAGCTTCCAGTTGATCAAAGAAGTGACGCAGTGAGCAGTTTAGTGTACGAAGCAAATGCAAGAGTTCGTGACCCAGTGTACGGTTGCGTTGGAGCAATATCGTACCTACAAAACCAAGTCTCAGAGCTTCAAATGCAGCTTGCAGTGGCTCAGGCTGAGATACTCTGCATCCAGATGCAGCATCATCCTGAGCCTCTGCTCGCTACTACTACATCACCATCAACAACTACTATTATGCCAAACCCATCATCACACAATAATATTATTATTGATCACACCACTACTGATGATCAAAAACCTTACATTTTCCACCACCAGAATGATCATGTACTGCTCCCTTCTCATCATCATCACCATCAGTACCTTAATTTTGCATCTAATAATTCTAACAATGTAATCCATGATTCTCTCTCTAGAGAGAGCATTTTTGGACATGACATGGTTTCTTGA 606 0.4356 MVGNSPCASCKLLRRRCAKDCIFAPYFPSDDPQKFAIVHKVFGASNVSKMLQELPVDQRSDAVSSLVYEANARVRDPVYGCVGAISYLQNQVSELQMQLAVAQAEILCIQMQHHPEPLLATTTSPSTTTIMPNPSSHNNIIIDHTTTDDQKPYIFHHQNDHVLLPSHHHHHQYLNFASNNSNNVIHDSLSRESIFGHDMVS* 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g0930 201 PANTHER LOB DOMAIN-CONTAINING PROTEIN 12-LIKE 2 181 - -
Aev03g0930 201 Coils Coil 85 105 - -
Aev03g0930 201 ProSiteProfiles LOB domain profile. 5 106 IPR004883 -
Aev03g0930 201 Pfam Lateral organ boundaries (LOB) domain 6 103 IPR004883 -
Aev03g0930 201 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 2 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g0930 Aev-Chr3 7639696 7642156 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g0930 3 115 AS2 family AT2G30130 91.150 1.76e-73 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Aev03g0930 LOB 1.4e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g0930 - - zju:107413913 268.085
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g0930 03 7639696 7642156 Aev07g0565 07 3482425 3483712 PCT