Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g0920 ATGACTCCAAACCTGGAATGTCGTATGTACGAGGCGAAGTACCCTGAGGTGGACATGGCGGTGATGATTCAGGTGAAGAACATCGCCGACATGGGCGCGTACGTGTCACTCCTCGAGTACAACAACATCGAAGGGATGATCCTCTTCTCGGAGCTCTCTCGTCGTCGGATTCGTAGTATGAGCAGCTTGATCAAAGTTGGCCGCACTGAGCCCGTTATGGTTATATCGACCTTAGCAAGCGCCGTGTCTCAGAGGAAGATATTCAGGCTTGTGAAGAGAGACACACTCAAGGTGTTTGTTTACTATCTCGCATGGGTGACAAATGTGGTTCCAGCTGTGACTGAAGAAGTGAAGGATGCTCTAGTAAAGAATATTAGAAGACAAATGACTCCCCAACCTTTGAAAATTAGGGCAGATATTGAAATGAAATGTTTTCAGTTTGATGGTGTTCTTCACATTAAGGAGGCAATGAGGAAGGCTGAAGCTGCTGGAAATGATGACTGCCCCGTGAAAATTAAACTTGTTGCTCCCCCCACTTTATGTGCTTACCACTCAGACTCTAGACAAGGTTAG 573 0.466 MTPNLECRMYEAKYPEVDMAVMIQVKNIADMGAYVSLLEYNNIEGMILFSELSRRRIRSMSSLIKVGRTEPVMVISTLASAVSQRKIFRLVKRDTLKVFVYYLAWVTNVVPAVTEEVKDALVKNIRRQMTPQPLKIRADIEMKCFQFDGVLHIKEAMRKAEAAGNDDCPVKIKLVAPPTLCAYHSDSRQG* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g0920 190 Gene3D EIF_2_alpha 133 184 IPR024055 -
Aev03g0920 190 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2 SUBUNIT 1 2 76 IPR011488 GO:0003723|GO:0003743
Aev03g0920 190 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2 SUBUNIT 1 106 180 IPR011488 GO:0003723|GO:0003743
Aev03g0920 190 Pfam Eukaryotic translation initiation factor 2 alpha subunit 112 179 IPR011488 GO:0003723|GO:0003743
Aev03g0920 190 SUPERFAMILY eIF-2-alpha, C-terminal domain 132 179 IPR024055 -
Aev03g0920 190 PANTHER BNAC04G04870D PROTEIN 2 76 - -
Aev03g0920 190 PANTHER BNAC04G04870D PROTEIN 106 180 - -
Aev03g0920 190 Pfam S1 RNA binding domain 15 75 IPR003029 GO:0003676
Aev03g0920 190 Gene3D - 3 88 IPR012340 -
Aev03g0920 190 ProSiteProfiles S1 domain profile. 18 93 IPR003029 GO:0003676
Aev03g0920 190 SUPERFAMILY Nucleic acid-binding proteins 7 76 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g0920 Aev-Chr3 7556708 7560912 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g0920 3 178 Eukaryotic Initiation Factors Gene Family AT5G05470 54.065 5.38e-66 204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g0920 K03237 - aof:109839928 199.519