Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g0910 ATGGATGGTTCCACTTTGCTGCTAGATTCATTAGTTAACATATCCAATGAAGTTTCATCAATGGACAAATCTCCATTTATACATGCAAGAAATGTTTCATCAATGATAAGGAGGATCAAGCTTCTTTCTTCTTTGTTTGAAGAGATTCATGTAATAGATACTCCACTTCCTCCATCTTCAATCATGTGTTTCAATGAGCTCTTAGCTCTGATAACAAAAGTGAAGATTTTGATCCAAGAGTGCAAGGATGGAAGCTATCTTTGGAGCCTAATTCGGTTAGAGTTCATGTCAAACCAATTCTTTGTGTTGGCAAAGGATATAGGAAGTGCCATTGATATTCTTCCTCTGAGTTTTCTTAACATCACAAAAGATACACAGGAGCAGGTTGAGCTTCTTCACAAACAATTGAAGAAGGTCGAGTTGTTCGTCGATTCGCGAGATCTACAACGAAGAGATTGGCTTCTAGATGTAATGGATAACAATAGATTACAAAACAAGAAGAATAAGGGCTTTGATGATTTTGGAAAAGTGGAAGAAATATTAAGCAAAATTGGTTTGAGAACCTTATCAGATTATGATAGGGAAATATCCAAACTAGAGACTGAAGCACAGAATCAGGCAGGAACAGGTGGACTAATTGTGGTCTCGAATATCAACAATCTCTTATCTCTGGTTTCATATTCCAAATCCATGATATTCAGAGATGGAGAAAGTATAAAAAATGAAGGAGAGAGCAAGAAACTATCAGAATTTCTACATCTCAAAATTCATGATAGTTCACCATCTTCTCAGTCCATGGTGACACTTGATATACCGGACGAATTCCGTTGCCCGATTTCACTTGAACTAATGAGAGACCCTGTGATTGTATCATCTGGACACACTTATGATAGAATTTCCATTTCACAATGGATAAACTCTGGTCATCAAAGTTGCCCCAAAAGTGGGCAAAGGCTAATTCACACTGCTCTAATACCGAACTACGCGTTGAAGAGCCTTGTCCGGCATTGGTGCTATGAGAACAAGGTCGCAGTGAATGAGCCGAACTTACCTCTTTCGGAGGTAAACATCAGCAAATTGAACTTGAGTGTGAATGATGCTGATCCTGTTTCTGCAAACAAAGCATCTGCAGATGCTGTCAAAATGACAGCAGAATTTCTAGTTGGGAAATTGGCAACTGGCTCAGTTGACATACAAAGAAAAGCTGCATATAAACTTCGGTTGCTTGCGAAAGGTGGAACCGATAATCGAAAAATTATAGCCGAGGCAGGGGCTATTCCATTTCTAGTAACACTATTAGGTTCCAATGATCCAAGAATCCAGGAACATGCAGTGACAGCATTGTACAACCTCTCCATCTTTGATAACAACAAGATTTTGATAGTGGCTGCTGGAGCAGTCGAGAACATAGTAGAAGTGCTCGAATCAGGGAAGACCATGGAAGCTAGAGAAAATGCAGCTGCAGCAATCTTCAGCTTGTCTATGTCTGACGATAACAAAATAACAATTGGAACTCATCCAAGGGCCATAAGGGCATTAGTTAGACTCCTGAGAGAAGGCACTCCTATAGGGAAAAGAGACGCTGCGACTGCGCTTTTCAATCTCGCAGTTTACAATCATAACAAGGAAAGAATTGTTGATGCTGGAGCCGTTCCTTTGCTCATCGACTTGTTGATGGATGACAAGGCTGGTATAACAGATGATGCATTGGCTGTGCTTGCTTTGCTTCTTGGTTGCTCTCAAGGGTTGGAAGAGATAAGGAATAGCAGAGCATTGGTGCCTCTACTTATTGATCTTCTGAGATTCGGATCAAACAAAGGGAAGGAAAATTCAATAACACTTCTACTTGGATTGTGCAAAGAAGAAGGCGAGGTTGTGGCGATGCGCCTCTTGGCTAATCCGAGGAGCATTCCTTCACTTCAGAGCTTGGCTTCTCATGGTTCTTTGAGAGCTAGAAGAAAAGCTGATGCATTGCTTAGGTTGCTCAATAGGTGCTGCTCACAACCTTATCATTCTCTTTGA 2022 0.407 MDGSTLLLDSLVNISNEVSSMDKSPFIHARNVSSMIRRIKLLSSLFEEIHVIDTPLPPSSIMCFNELLALITKVKILIQECKDGSYLWSLIRLEFMSNQFFVLAKDIGSAIDILPLSFLNITKDTQEQVELLHKQLKKVELFVDSRDLQRRDWLLDVMDNNRLQNKKNKGFDDFGKVEEILSKIGLRTLSDYDREISKLETEAQNQAGTGGLIVVSNINNLLSLVSYSKSMIFRDGESIKNEGESKKLSEFLHLKIHDSSPSSQSMVTLDIPDEFRCPISLELMRDPVIVSSGHTYDRISISQWINSGHQSCPKSGQRLIHTALIPNYALKSLVRHWCYENKVAVNEPNLPLSEVNISKLNLSVNDADPVSANKASADAVKMTAEFLVGKLATGSVDIQRKAAYKLRLLAKGGTDNRKIIAEAGAIPFLVTLLGSNDPRIQEHAVTALYNLSIFDNNKILIVAAGAVENIVEVLESGKTMEARENAAAAIFSLSMSDDNKITIGTHPRAIRALVRLLREGTPIGKRDAATALFNLAVYNHNKERIVDAGAVPLLIDLLMDDKAGITDDALAVLALLLGCSQGLEEIRNSRALVPLLIDLLRFGSNKGKENSITLLLGLCKEEGEVVAMRLLANPRSIPSLQSLASHGSLRARRKADALLRLLNRCCSQPYHSL* 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g0910 673 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 270 346 IPR013083 -
Aev03g0910 673 ProSiteProfiles U-box domain profile. 270 344 IPR003613 GO:0004842|GO:0016567
Aev03g0910 673 SMART Ubox_2 274 337 IPR003613 GO:0004842|GO:0016567
Aev03g0910 673 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 508 550 IPR000225 GO:0005515
Aev03g0910 673 PANTHER U BOX DOMAIN-CONTAINING 6 669 - -
Aev03g0910 673 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 424 466 IPR000225 GO:0005515
Aev03g0910 673 Gene3D - 504 664 IPR011989 -
Aev03g0910 673 SUPERFAMILY RING/U-box 258 345 - -
Aev03g0910 673 SUPERFAMILY ARM repeat 385 662 IPR016024 -
Aev03g0910 673 CDD RING-Ubox_PUB 275 317 IPR045210 -
Aev03g0910 673 Pfam Armadillo/beta-catenin-like repeat 539 574 IPR000225 GO:0005515
Aev03g0910 673 Pfam Armadillo/beta-catenin-like repeat 414 452 IPR000225 GO:0005515
Aev03g0910 673 SMART arm_5 413 453 IPR000225 GO:0005515
Aev03g0910 673 SMART arm_5 496 537 IPR000225 GO:0005515
Aev03g0910 673 SMART arm_5 579 620 IPR000225 GO:0005515
Aev03g0910 673 SMART arm_5 538 578 IPR000225 GO:0005515
Aev03g0910 673 SMART arm_5 454 495 IPR000225 GO:0005515
Aev03g0910 673 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 1 6 669 - -
Aev03g0910 673 Coils Coil 189 209 - -
Aev03g0910 673 Gene3D - 385 503 IPR011989 -
Aev03g0910 673 Pfam U-box domain 271 342 IPR003613 GO:0004842|GO:0016567
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g0910 Aev-Chr3 7478163 7480184 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g0910 10 668 U-box Gene Family AT3G46510 38.462 7.98e-126 386
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g0910 - - gmx:100793498 954.896
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g0910 03 7478163 7480184 Aev03g0910 03 7478163 7480184 ECH