Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g0909 ATGGCAACGAAAGCAAGTATGAAAGGTTATGAACCACGATCAAGCTCTTCTTGTGCAGCTTGCAAGTTATTGAAAAGAAGGTGCATACCAAATTGCATCTTCGCACCTTACTTTCGCTCCGATGAGTGCAAGAAATTCGCAAAAGTTCACAAAGTTTTTGGAGCAAGCAATGTTAGCAAGATCCTAATTGAAGTCCCTGAAGAACAGAGAGAAGACACTGTGAATTCCTTGGCCTATGAAGCTGAAGCGAGACTCAGAGATCCTGTTTATGGATGCATTGGGGCTATAGCTCTCTTGCAGAGGAAGATGCTTGAGCTTCAGAATGATCTTGCTATTGCTAAGGACCGACTCGCTCGTTGCGTCGCTAATTCTGCTATTTCTGATGACTCTGTTTCTGATTTTGCGATTAATTGTAATGATAATGCCCAATTTCTTGTTACTTTGCCCCCTTTTCCTGAATCTTCAACTTGCAGTGATTTCAGTAATGATAATTTCTTCCACTACTCTAATTCGTCGTCGTCGTCGTCTCAATTCTTGGTGAGCCGACATGATCAAACGGTAGTGGATGATTTCAATCAAATTCCATACATATTTTAA 597 0.4104 MATKASMKGYEPRSSSSCAACKLLKRRCIPNCIFAPYFRSDECKKFAKVHKVFGASNVSKILIEVPEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQRKMLELQNDLAIAKDRLARCVANSAISDDSVSDFAINCNDNAQFLVTLPPFPESSTCSDFSNDNFFHYSNSSSSSSQFLVSRHDQTVVDDFNQIPYIF* 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g0909 198 Coils Coil 96 116 - -
Aev03g0909 198 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 7 164 - -
Aev03g0909 198 Pfam Lateral organ boundaries (LOB) domain 17 114 IPR004883 -
Aev03g0909 198 ProSiteProfiles LOB domain profile. 16 117 IPR004883 -
Aev03g0909 198 PANTHER LOB DOMAIN-CONTAINING PROTEIN 21 7 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g0909 Aev-Chr3 7470637 7471233 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g0909 7 132 AS2 family AT3G11090 74.603 2.19e-65 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Aev03g0909 LOB 2.2e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g0909 - - gmx:100305534 261.536
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g0909 03 7470637 7471233 Aev03g0909 03 7470637 7471233 ECH