Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aev03g0903 | ATGTCGGCCCAACACGATTCTCGTACATTAAATTGGCACTACACAGAGCTAGACGACAAAGACCTAGAAATCCGAGGAAGAACACTCTTCTTCATCATCGTACTCTTCTCCATTATCCTCCTCATCACTGTCCTCTTCCTCTACACGCGCTGGGTCTGCCGCTACCACTCGCAACACATCCACCGTCGATCCGCCGCCGCCGCCGCACAAGCCCTCCACGCGCCGCCGTCACTTCCGCCGCAGGGATTGGACCTCGATTCCATAAAGAAGCTTCCGATAATCCTCCACCAGGCGCCGGCGGAGCCTCACGGCGGCGCGTGGGAGGAGACGGAGTGCTGCATCTGCCTTGGCGAGTTTTCCGACGGAGAGAAGGTGAAGGTTCTTCCGACGTGCGAGCACTATTTTCACTGTGATTGCGTCGATAAGTGGTTAACGCATCACTCTACTTGCCCAATTTGTAGGGCTTCACTTAAAATTGAATCTTCGTTCCCAAAGATTTTGATTGAGGAACCACCTATTAGAATTGACATCCAATTCTAA | 540 | 0.5259 | MSAQHDSRTLNWHYTELDDKDLEIRGRTLFFIIVLFSIILLITVLFLYTRWVCRYHSQHIHRRSAAAAAQALHAPPSLPPQGLDLDSIKKLPIILHQAPAEPHGGAWEETECCICLGEFSDGEKVKVLPTCEHYFHCDCVDKWLTHHSTCPICRASLKIESSFPKILIEEPPIRIDIQF* | 180 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aev03g0903 | 179 | SUPERFAMILY | RING/U-box | 107 | 160 | - | - | |
Aev03g0903 | 179 | Pfam | Ring finger domain | 111 | 154 | IPR001841 | - | |
Aev03g0903 | 179 | ProSiteProfiles | Zinc finger RING-type profile. | 112 | 154 | IPR001841 | - | |
Aev03g0903 | 179 | PANTHER | RING-H2 FINGER PROTEIN ATL66 | 3 | 168 | - | - | |
Aev03g0903 | 179 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 75 | 159 | IPR013083 | - | |
Aev03g0903 | 179 | PANTHER | RING-H2 FINGER PROTEIN ATL51-RELATED | 3 | 168 | IPR044675 | - | |
Aev03g0903 | 179 | CDD | RING-H2_PA-TM-RING | 111 | 154 | - | - | |
Aev03g0903 | 179 | SMART | ring_2 | 112 | 153 | IPR001841 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aev03g0903 | Aev-Chr3 | 7412578 | 7413117 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aev03g0903 | 7 | 162 | C3H Transcription Factor Family | AT3G11110 | 40.373 | 4.02e-33 | 114 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aev03g0903 | - | - | aip:107623622 | 288.5 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Aev03g0903 | 03 | 7412578 | 7413117 | Aev07g0586 | 07 | 3622378 | 3622917 | PCT |