Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g0903 ATGTCGGCCCAACACGATTCTCGTACATTAAATTGGCACTACACAGAGCTAGACGACAAAGACCTAGAAATCCGAGGAAGAACACTCTTCTTCATCATCGTACTCTTCTCCATTATCCTCCTCATCACTGTCCTCTTCCTCTACACGCGCTGGGTCTGCCGCTACCACTCGCAACACATCCACCGTCGATCCGCCGCCGCCGCCGCACAAGCCCTCCACGCGCCGCCGTCACTTCCGCCGCAGGGATTGGACCTCGATTCCATAAAGAAGCTTCCGATAATCCTCCACCAGGCGCCGGCGGAGCCTCACGGCGGCGCGTGGGAGGAGACGGAGTGCTGCATCTGCCTTGGCGAGTTTTCCGACGGAGAGAAGGTGAAGGTTCTTCCGACGTGCGAGCACTATTTTCACTGTGATTGCGTCGATAAGTGGTTAACGCATCACTCTACTTGCCCAATTTGTAGGGCTTCACTTAAAATTGAATCTTCGTTCCCAAAGATTTTGATTGAGGAACCACCTATTAGAATTGACATCCAATTCTAA 540 0.5259 MSAQHDSRTLNWHYTELDDKDLEIRGRTLFFIIVLFSIILLITVLFLYTRWVCRYHSQHIHRRSAAAAAQALHAPPSLPPQGLDLDSIKKLPIILHQAPAEPHGGAWEETECCICLGEFSDGEKVKVLPTCEHYFHCDCVDKWLTHHSTCPICRASLKIESSFPKILIEEPPIRIDIQF* 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g0903 179 SUPERFAMILY RING/U-box 107 160 - -
Aev03g0903 179 Pfam Ring finger domain 111 154 IPR001841 -
Aev03g0903 179 ProSiteProfiles Zinc finger RING-type profile. 112 154 IPR001841 -
Aev03g0903 179 PANTHER RING-H2 FINGER PROTEIN ATL66 3 168 - -
Aev03g0903 179 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 75 159 IPR013083 -
Aev03g0903 179 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 3 168 IPR044675 -
Aev03g0903 179 CDD RING-H2_PA-TM-RING 111 154 - -
Aev03g0903 179 SMART ring_2 112 153 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g0903 Aev-Chr3 7412578 7413117 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g0903 7 162 C3H Transcription Factor Family AT3G11110 40.373 4.02e-33 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g0903 - - aip:107623622 288.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g0903 03 7412578 7413117 Aev07g0586 07 3622378 3622917 PCT