Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g0902 ATGGCCATATCCTTAAACTCCATCACCACCTTCACTTCTCCGAAGTTGCAAGCAAAGTATAAGGATGCATCAAGGTATTCTTTTGGAGCTTCTTTACCAAAGGCCACTCAGTTTACACCCTTCTCGGTAACGACCCGATCGAGAATGCTTCCCAAGGAAAAAAGATTCGGCCATTGTTTTTCAGTCGCAGACAGTGATCAGATTGCAGCAGATTCCAGTAGCAAGGATTTTGGCAATGCCGAAAATAAAGTTGAGGCTGAGTCAGTGCCTCAAGCATCAGAAGGTACCAATGAGTCAATTAACCAAAAGGAAGGGTCAGCAGCATCTCCTAACTCGCAATCAACGGCAAAACGACCTTCCCTGACAGCGAGGGAGAGGTTAAGGGCGGCTCGAGTCCTAAGCCGGTACACGGAATCAAAAGCACCGTCTAAACCAGACATAGGGAGCAGAGTGTTGGATGCATTGAAAGAGAGCGAGCGAGGGAAGAAAAGATCTCGGCTTCCGGAAGCACCTACTAACTTGTTTGATGACAGCAAGAGAGGGATGCCGAAGCCGGGTTTGACTTTCCAATTTCCTGGTGGTTTTGATCTGTTCATCATTGCATTTTCATTTGTTTTTATCATCCCTTCAGAGACACTTCCTTATTCATGGCCTGTTCCAATTGAAGTTGCTTCAGAGGAATTTAGAGCTGCAAGTGCTTCCAAGAGCCATAGTCAAGCAGAGAAGAGGCGCAGAGATAGGATCAATGCTCAGCTTGCAAGTCTCAGAAAACTTATCCCCAAATCTGATAAGATGGACAAAGCAGCTTTACTAGGAAGTGTGATAGATCATGTCAAAGATCTAAAGAGAAAAGCAATGGATATAAGCAGAGGCAATATCACAGTTCCAACAGAAACAGATGAAGTGACAATTGAGTATGATCCTGTTCAATATGAAAACTTGACCAAAAACAAGAATGCAAACAAAAAATTCAAAGACAGTAATAGTAATAGTAATAGTTTTGTGATCAAAGCTTCTGTTTGCTGTGATGATAGACCAGAACTGTTCTCTGAGCTCATCAAGGTTCTCAAAGGATTGAGACTCACTGCTCTTAAAGCTGACATAGCCAGTGTTGGTGGCAGAATCAAAAGCATTTTTTTGCTCTGTTCTAAGGATAATGATGAAGAGGCTAGTCTTTGCCTTAGTACTCTAAAACATTCCCTTAAGTCTGTTGTGACCAAAATTGCTGCTTCTTCCATCGCATCATCTTGTCCTACTAGAAGTAAGAGGCAGAGGTTCTTCTTACCTTCTCATTGCATATAA 1302 0.4263 MAISLNSITTFTSPKLQAKYKDASRYSFGASLPKATQFTPFSVTTRSRMLPKEKRFGHCFSVADSDQIAADSSSKDFGNAENKVEAESVPQASEGTNESINQKEGSAASPNSQSTAKRPSLTARERLRAARVLSRYTESKAPSKPDIGSRVLDALKESERGKKRSRLPEAPTNLFDDSKRGMPKPGLTFQFPGGFDLFIIAFSFVFIIPSETLPYSWPVPIEVASEEFRAASASKSHSQAEKRRRDRINAQLASLRKLIPKSDKMDKAALLGSVIDHVKDLKRKAMDISRGNITVPTETDEVTIEYDPVQYENLTKNKNANKKFKDSNSNSNSFVIKASVCCDDRPELFSELIKVLKGLRLTALKADIASVGGRIKSIFLLCSKDNDEEASLCLSTLKHSLKSVVTKIAASSIASSCPTRSKRQRFFLPSHCI* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g0902 433 Gene3D - 227 289 IPR036638 GO:0046983
Aev03g0902 433 MobiDBLite consensus disorder prediction 71 124 - -
Aev03g0902 433 MobiDBLite consensus disorder prediction 156 170 - -
Aev03g0902 433 Pfam Helix-loop-helix DNA-binding domain 235 281 IPR011598 GO:0046983
Aev03g0902 433 CDD bHLH_AtAIG1_like 229 304 - -
Aev03g0902 433 PANTHER TRANSCRIPTION FACTOR BHLH30 226 431 IPR045847 GO:0003700|GO:0006355
Aev03g0902 433 SMART finulus 238 287 IPR011598 GO:0046983
Aev03g0902 433 PANTHER TRANSCRIPTION FACTOR BHLH51 226 431 - -
Aev03g0902 433 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 232 281 IPR011598 GO:0046983
Aev03g0902 433 MobiDBLite consensus disorder prediction 156 181 - -
Aev03g0902 433 MobiDBLite consensus disorder prediction 89 120 - -
Aev03g0902 433 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 234 290 IPR036638 GO:0046983
Aev03g0902 433 CDD ACT_UUR-ACR-like 339 404 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g0902 Aev-Chr3 7385885 7396517 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g0902 229 431 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G40200 46.377 2.12e-47 161
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aev03g0902 HLH 2.9e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g0902 - - gmx:100799687 299.286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g0902 03 7385885 7396517 Aev03g0902 03 7385885 7396517 ECH
Aev03g0902 03 7385885 7396517 Aev07g0590 07 3635666 3637196 PCT