Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev03g0887 ATGATGAAACCACCTCCCTCCTCCGCCACCGTCAGTATCTTCACCGCCGCTATATACATATTCACTCTGATTACCTCTTCTCATGCTTTCGGCTCCGGCGCCACACTCGCCGTCACCGACGCCTCCGCCACCGTATGCGGCGTCGTCGCCGGAGACGCTACACAGCGCATTGAGTGCTACCGTCTCGGCCAGCTCCTCCCCGCCACCCCAAACGTCTCCTTCTCCGCCGTCTCCGGCGGCGGAACCTTCTTCTGCGGCCTCAGGTCCGGTAACTACAGCTTGCATTGCTGGGACACCGTTACCACCACGAACGGAACTTTCAATAGAAGAAGACTATACGGAAACGACACCGTTTTGTTGGAGAACCTCGCCGTCGGAGAAACTCACGTTTGCGCCACGGTGGTCGGTGTAGGAACCGTGAAGTGCTGGAGATTCAATAACGGAACGTTCGAATTGCCAAATGAAACCCTTCAATTCTCTTCGATCTCATCTGGGTCTCGATTCTCTTGTGGGATTCTGAAACAGAGCAATTTGGTTAGGTGTTGGGGTGAAAGGGGAATTTCAAGTGGGATAGAGAGTGGGTTTGGGAACATGTCCATGATCAATATTGTTGCTGGTGGTTCACATGTTTGTGGGTTGAATTCAACAGGGTTTTTGGTTTGCATAGGGAATAATAATAGTAATGATATCGATTTTCCTCAAGGTGGGGCTTGGGAATTTGGTGGGTTAACACTTGGAGCTAGCCATGGATGTGCGATCAGAAGCGCGAATGGTTCTGTCGTTTGTTGGGGTGGGAATGGACAATTCTCTGTGAATTCAACAAAAGATGTTTCCTTTGAATTGATTGTTTCTGGGTCTAATTTCACTTGTGGATTGGGCTCGAGGATAATGAGGCGCCAGAGGAGTGGAACCTCATCGGTTAAACACCCTGATAGGGCTGAGGAGTTCACTCTTGCTGAGCTTGTAGTAGCCACCAACAGTTTCTCACTTGAGAACAAGATTGGTGCTGGAAGCTTTGGTGTTGTGTATAGGGGAAAACTCGCCGACGGCCGTGAGGTGGCGATCAAGAGGGGCGAGACCGGTTCAAAGATGAAGAGGTTTCAGGAGAAAGAGAGTGCATTTCAGTCTGAATTGTCCTTCTTGTCTCGCCTACACCACAAGCACTTGGTTAGGTTGGTTGGGTTCTGTGAGGAGAAAGATGAGAGGCTATTGGTATATGATTACATGAAAAATGGGGCATTATATGATCATTTGCATAATAAGAACAATGTGGAAAAGACTAGCAGCTTCTTGAATTCATGGAAAATGAGGATCAAAATCGCATTGGATGCTTCCCGGGGGATCGAGTATCTTCACAATTATGCAGTTCCATCCATAATTCACAGAGATATCAAGTCCTCCAACATCCTACTCGACGCGAATTGGACGGCGAGAGTATCTGATTTTGGATTGTCAATGATGAGTCCTGAGCCGGACCGCGATCACAGGCCGATGAAGGCAGCCGGAACGGTTGGATACATCGATCCGGAGTACTATGGCCTGAATGTACTTACAGCAAAGAGTGATGTCTATGGCCTAGGAGTGGTGCTGCTAGAGCTTCTAACCGGAAAAAGGGCCATATTCAAGAACGGCGAAGACAGCGGCGCCCCATTAAGCGTGGTAGATTTTGCAGTGCCTGCAATTTTGGCTGGTGAATTGGTGAAGGTTTTGGACCATAGGGTTGGTCCACCAGAGATTAATGAAGCTGAGGCAGTAGAGTTAATGGCTTATACTGCATTGCATTGTGTGAATTTAGAAGGGAAAGATAGACCAACAATGGCCGATATTGTGGCCAATTTGGAGAGGGCTTTGGTTCTTTGTGAGAGTAGCCATGGCAGCATTTCCAGCGGTATAATCTCCATTGTTTCAGATTGA 1914 0.4843 MMKPPPSSATVSIFTAAIYIFTLITSSHAFGSGATLAVTDASATVCGVVAGDATQRIECYRLGQLLPATPNVSFSAVSGGGTFFCGLRSGNYSLHCWDTVTTTNGTFNRRRLYGNDTVLLENLAVGETHVCATVVGVGTVKCWRFNNGTFELPNETLQFSSISSGSRFSCGILKQSNLVRCWGERGISSGIESGFGNMSMINIVAGGSHVCGLNSTGFLVCIGNNNSNDIDFPQGGAWEFGGLTLGASHGCAIRSANGSVVCWGGNGQFSVNSTKDVSFELIVSGSNFTCGLGSRIMRRQRSGTSSVKHPDRAEEFTLAELVVATNSFSLENKIGAGSFGVVYRGKLADGREVAIKRGETGSKMKRFQEKESAFQSELSFLSRLHHKHLVRLVGFCEEKDERLLVYDYMKNGALYDHLHNKNNVEKTSSFLNSWKMRIKIALDASRGIEYLHNYAVPSIIHRDIKSSNILLDANWTARVSDFGLSMMSPEPDRDHRPMKAAGTVGYIDPEYYGLNVLTAKSDVYGLGVVLLELLTGKRAIFKNGEDSGAPLSVVDFAVPAILAGELVKVLDHRVGPPEINEAEAVELMAYTALHCVNLEGKDRPTMADIVANLERALVLCESSHGSISSGIISIVSD* 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev03g0887 637 ProSitePatterns Protein kinases ATP-binding region signature. 334 356 IPR017441 GO:0005524
Aev03g0887 637 Pfam Protein kinase domain 329 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev03g0887 637 Gene3D - 29 312 IPR009091 -
Aev03g0887 637 ProSitePatterns Serine/Threonine protein kinases active-site signature. 459 471 IPR008271 GO:0004672|GO:0006468
Aev03g0887 637 SUPERFAMILY RCC1/BLIP-II 29 273 IPR009091 -
Aev03g0887 637 Gene3D Phosphorylase Kinase; domain 1 313 408 - -
Aev03g0887 637 Gene3D Transferase(Phosphotransferase) domain 1 409 624 - -
Aev03g0887 637 PANTHER SERINE/THREONINE-KINASE CCR4-LIKE PROTEIN 297 632 - -
Aev03g0887 637 PANTHER SERINE/THREONINE-KINASE CCR4-LIKE PROTEIN 10 295 - -
Aev03g0887 637 SUPERFAMILY Protein kinase-like (PK-like) 306 613 IPR011009 -
Aev03g0887 637 ProSiteProfiles Protein kinase domain profile. 328 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev03g0887 637 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 297 632 IPR044815 GO:0004674
Aev03g0887 637 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 10 295 IPR044815 GO:0004674
Aev03g0887 637 SMART serkin_6 328 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev03g0887 Aev-Chr3 7239161 7241578 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev03g0887 293 637 Receptor kinase-like Gene Family AT3G55950 75.843 3.68e-180 530
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Aev03g0887 Pkinase 8.1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev03g0887 - - jre:108984745 595.119
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev07g0603 07 3756760 3759183 Aev03g0887 03 7239161 7241578 ECH
Aev03g0887 03 7239161 7241578 Aev03g0887 03 7239161 7241578 ECH